Syntrophotalea carbinolica: Pcar_0129
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Entry
Pcar_0129 CDS
T00285
Name
(GenBank) RHS repeat protein
Organism
pca
Syntrophotalea carbinolica
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
DUF6531
Motif
Other DBs
NCBI-ProteinID:
ABA87391
UniProt:
Q3A8A1
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Position
complement(158480..162763)
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AA seq
1427 aa
AA seq
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MNLFKWILLCVLVLLTAPGLVFADDPEYDPFYTKGVPLDAAPPIQGVFEEVDPFSGNLKI
VQTDLDLPQNGGLELKIQRTYDSAIWSRRDTCYPGIVAINRMSPVGIGWTMHMGIVRNPW
GNDPVLELPDGSRHAFYRDINDPTYTKKISKDFWVYKRVSEDPDPDRWEAISPNGIVYTF
EYTWKNGDGVGYNDGSIVAQCIKIENPQRTSSISISYFNNFESGLAPAYSYIKSIVDTTG
RTINFSYDLTLDPLNPKHQLKSISYGNQTFTYKYNKFYPPNGWIVNYLKEAIPPVGNSWK
YAYEFPEGTMSWGQLAKFTYPTGGVIEYSYDDIKFATGIVSPAFRVITQRKTSGRDIPTG
TWTYQYNSGGSSGDVTTITGPDGMKEVYSYYGWGNSRSGNVWRVGQLTEKKLYKGTTLLQ
TESYNWGAPNTSGGVKVSTNRLENADWNGTGGMVIDSFIWVPFLTSKVVARDGKTYTTTF
SNHDSYGNPKKVVETGDKTRTTQLTYWTNAGKNIVQGKPATEKVTGGFPGSFTTSYTYDT
NGNLTKLNKYGVITKYTYAKNGNLSKIIDANTKTWTYAWSKGRISKITNPIYSVSRVINA
NGTIAKQTNGRGYATLYTYDKNLRLTKVTPPLGNAISYTYPADSSYRKETRGSFFTKAYF
DGFGRPTGSLNSKGVRSDIDYKAYGSKNFTDSNVGDKVSFDALERPAQAVHKDNKAIQYV
YSGNTVTVKDEAGNSTVQTYNAFGSPDEKLLVAVKDANGHTAGYNYNILGSLTTITYGGI
TRSFGYNGKNFLTSESNPETGSITYGRDNVGNLTGKTDGTGTLSYTYDAINRLTKIAKGT
EIITIGYDKADNRTFLLSPDASYSFVFDKANRLTAKNETILGTAYTSSYAYDGNDNLTGI
TYPGNRVVTYQYNGYNEVTTIPGFVASATYNLAGQPLGYTHGNGLGAVYTYNARYLPTGM
SAGSIMGYTYGYDSRGNTVSITNGLDANKDQSFGYDKLNRITAFNGAWGNGSFTYDTSGN
RLTKTIDGVDTTYNYASNRLTGTTGNEPGSYAYNTAGHLTSGAWGGKSYSLTYDGFNQVK
SFTSGGTLVAEAGYDGDGLRIKKITADGTTVYHYDPAGNVLSEDQPDGSKTDYIYLNGKL
LAKVDVNAELAEEVFFYHTDFAGTPLAMSDASGQKIWEADDKPFGEEFTVDGNGENDKRF
VGKEKDEETGLNYFGARYLSAQTGRFLAPDPVRAVDIVRGEINASLLTEPQRLSTYTYSI
NNPYRFVDSRGLQVSAILDTKTNTLTITDSDKEVTISVSAFTGGHLDKNGNIVKPGVAPQ
TPASPGTYFITDNPNYRPNHPNWYGLLKNDDTIDDYFDNNRGGARLHGGTLSYGCVTIPY
TKNKREDWNKVLNILKNTKTEAINYRKGPHWYNKSGRITKYGTLQIK
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttttcaagtggattcttctatgcgtcctggtgcttttgactgcaccgggcctg
gtctttgctgacgatcctgagtacgaccccttttataccaagggcgttcccctggatgcc
gcccctcccattcaaggtgtcttcgaggaagtagatcctttctcgggcaacctgaagatc
gttcaaaccgatctggacttaccccagaacggtggcctggagctcaaaattcagcgtact
tacgacagtgccatctggagccggcgggatacgtgttatcccggcattgtcgccataaac
agaatgagtcccgtgggcatcgggtggaccatgcatatggggatcgtgcgcaacccgtgg
ggaaacgatcctgttttggagttgcctgatggctccagacacgctttttatagggatata
aacgatcccacttatacaaaaaaaatatccaaagatttttgggtatacaaaagagtctct
gaagatccagacccagatcgatgggaggcgatttctcctaatggtattgtatatacattt
gagtatacctggaagaatggtgacggtgttggctacaatgatggttcaattgtggcacag
tgcattaagattgagaatccacaaaggacgtcttcaatatcaattagttactttaataac
tttgaatccggcctggctccggcctattcctatatcaagtcgattgttgataccaccggc
agaacaattaattttagctatgacttaacccttgacccgttaaatccaaaacatcaactc
aaatcaatatcctacggaaatcaaactttcacttataaatataataaattctatccgcca
aatggctggatagtaaattatctcaaggaagcgattccccctgttggtaattcatggaaa
tatgcctatgaatttccagaagggacaatgtcttggggacagttggcaaaattcacctat
ccaaccggcggagtcattgaatactcctatgatgatattaaatttgctacgggtatagtt
agtcctgcattcagagtcatcacgcaaagaaagaccagtggccgcgacatcccgacagga
acttggacctaccaatataactcgggagggtcttccggggatgtgacgaccattactggc
ccggacggaatgaaggaggtctatagctactacggctggggcaacagccggagtggtaat
gtgtggcgagtcgggcagcttacagagaagaaactctacaaggggaccactctgctccag
accgagtcctacaactggggtgctcccaacacctcgggcggggtgaaggtttccaccaac
cggttggaaaatgcagactggaacggtaccggtgggatggtgattgattcatttatctgg
gtgcctttcctgacgtcgaaggtggtcgcccgcgacggcaagacctatacgacgaccttc
agcaatcacgactcctatggcaatccgaaaaaggttgtcgagaccggtgacaaaacccgg
accacccagttaacctattggaccaatgccggcaagaacatcgtgcagggcaaaccggcc
accgaaaaggtcaccggcgggtttcccggatcttttaccaccagttacacctatgacacc
aacggcaatctgaccaaactgaacaagtatggcgttatcacgaaatacacatatgccaag
aacggcaatctctcgaaaatcatcgacgccaacaccaaaacctggacctacgcctggtca
aagggccgcatctccaaaatcaccaatccgatctacagcgtttcgcgtgtcatcaacgcc
aacggaaccattgccaaacaaaccaacggcaggggctacgccaccctctacacctatgac
aaaaacctgcgtttaaccaaggtcacgccgccgctgggcaatgccatctcctacacctat
cccgccgacagctcctaccgcaaggaaaccaggggaagtttttttacaaaggcctacttt
gacggattcggacggccgacgggatccctgaacagcaagggggtccgctccgatatcgac
tacaaggcctacggcagcaaaaatttcaccgattccaatgtcggcgacaaggtctctttc
gatgccctggaaagaccggcccaggccgttcacaaggacaacaaggcaatccagtatgtt
tactcgggcaacaccgtcacggttaaagatgaagccggcaacagcaccgtacagacctat
aatgccttcggcagtccggacgaaaagctgctggtcgcggtcaaggatgccaatggccat
accgccggctacaactacaacatcctcggcagtctgaccaccatcacctatggcgggatc
acacgcagtttcggctacaacggcaagaattttctgacctccgaatcgaatcccgaaacc
ggttccatcacctatgggcgtgacaacgtcggcaacctgaccggcaaaaccgacggcacc
ggaaccctctcctacacctacgatgcgatcaacaggctgacgaagattgccaaaggcacg
gaaatcatcaccatcggctatgacaaggcggataaccgcactttcctgctctcccccgac
gccagttacagctttgtcttcgataaggccaatcgcttgaccgccaaaaacgaaaccatc
ctggggacggcctatacctcaagctacgcctacgacggcaacgacaatctcaccggcatt
acctatccgggcaaccgggtcgttacctatcaatacaacgggtacaacgaagtcaccacc
atccccggattcgtcgcctcggccacctacaatctcgccggacaaccgctcggctacacc
catggcaacgggctgggcgccgtctatacctacaatgcccgttatctgccgaccgggatg
agcgccggatcgatcatgggctatacctacggctacgattcacggggcaacaccgtcagc
atcacgaacgggctggacgcaaacaaagaccagagcttcggctatgacaagctcaaccgc
atcaccgccttcaacggcgcctggggaaacggctcctttacctacgatacctccggcaac
cgcctgaccaaaaccatcgacggagttgacaccacctacaattacgcctccaaccgcctg
accggcaccaccggcaacgagcccggctcgtatgcctacaataccgccggacacctgacc
tcgggcgcctggggcggcaaaagctacagcctgacttacgacggcttcaaccaggttaaa
tccttcacgtcgggcggtaccctggtggccgaggccggttacgacggggacggtttgcgg
atcaaaaagatcaccgcagacggcaccaccgtctaccattacgatccggccggaaacgtg
ctatccgaggaccagcccgatggcagcaaaaccgactatatctacctcaacggcaagctg
ctggccaaggttgatgtcaacgccgaacttgcagaagaggttttcttctatcatactgat
tttgcagggacgccgctggccatgagcgacgcctcggggcaaaagatctgggaggcggac
gacaagcccttcggcgaggagtttacggtagacggcaatggcgagaacgacaaacggttt
gtcggcaaggagaaggatgaggagaccgggctgaactacttcggggcgcggtatctgtcg
gcacaaacgggacggtttctcgcgccggatccggttagggcggtggatattgttcggggg
gaaattaatgcctcgctcttgactgagccccaacgactgagtacttatacttattccata
aataatccttatagatttgtagattcaagaggactccaagtatcagcaattctagataca
aaaactaacacgttaacgattactgattctgacaaggaagtaacgatcagtgtatcagcg
tttacgggagggcaccttgacaaaaatggaaatatcgtaaaaccgggcgtagcaccacag
acaccagcgtctcccggtacatatttcatcactgacaatccaaactataggccaaatcat
ccaaattggtatgggttactaaaaaatgatgatactattgatgattatttcgacaataat
cgcggaggagcaagacttcacggcggcacgctaagttatggttgtgttacaattccttac
acaaaaaacaagcgcgaagattggaataaagttttaaatatattaaaaaacacaaaaacc
gaagctattaattatcgcaaaggcccacattggtataataaatcgggaaggataactaaa
tatggaactttacaaattaaataa
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