Syntrophotalea carbinolica: Pcar_0142
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Entry
Pcar_0142 CDS
T00285
Name
(GenBank) HIM domain protein
KO
K21449
trimeric autotransporter adhesin
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_0142
Transporters [BR:
pca02000
]
Other transporters
Pores ion channels [TC:
1
]
Pcar_0142
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Ortholog
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GFIT
Motif
Pfam:
YadA_head
YadA_stalk
YadA_anchor
Phage_T7_tail
LbR_Ice_bind
Motif
Other DBs
NCBI-ProteinID:
ABA87403
UniProt:
Q3A889
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All DBs
Position
176001..177647
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AA seq
548 aa
AA seq
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MRQSKRIGLYRWTRWGARARTLVVGVLVVTFVGFGSIAWGLQYDQPLDLSDDADDGTALG
TSLSNVALGSYSVATGAVSTATGYHSQSTGLNSAAYGGWSVASGDYSTAIGERSSASGKN
STAVGRDSRASGENSTAVGRYSRASGANSTAVGESSTASGGESTAVGENSTASGYDSTAV
GRSSKASGYDSTALGEASIASGDYSLATGQYSRALGAESTALGENSTASGVRSVALGQGS
EATEAYTVSVGTSTYQRRIVNVADGVADSDAATVGQMKAADATLQDHIDAEAAARAAADT
AMQTDIGALQDQALGTSWTAGSNDVAASASGSGSTALGSGASARTRDTAIGSNATVSADG
SVALGADTTVASENSVAVGADSSVAAGAAGGVALGQNASVASGATGSVAIGQDSVADEAD
TVSVGSSGNERRVTNVADGVNATDAVNVQQLQQFSASTSGAINRLDSRIDNLSRDAFSGI
AAVAAIAGIPAPAQGKRTSLGIGYGNYKGENAIAVGFKSDITDNIRITTAIAHSNSDVTT
SAGVGWSW
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgcggcagtcaaaacgtatcgggttatatcggtggacacggtggggcgccagggcgcgc
acgctggtggtcggggtgttggttgtaacctttgtcggtttcggttcgattgcctggggg
ttgcagtacgaccagcctctggatctatctgacgatgccgatgatggcaccgccttgggg
acttctcttagtaacgtggctctgggttcctatagcgtggctaccggtgcggtgagtacc
gccaccggttatcatagtcagtccaccggtttgaacagcgccgcctacggcggatggagc
gtggccagtggtgactacagcaccgcgataggcgagcgcagcagcgccagcggcaaaaac
agtaccgcagttggccgggattcccgcgccagcggcgaaaacagtaccgcagttggccgg
tatagccgcgcaagcggcgcaaacagtaccgcagttggcgagtccagcactgccagcggt
ggcgagagtaccgcagttggcgagaacagcactgccagcggttacgacagtaccgcagtt
ggccggagtagcaaggctagcggttatgacagtactgctcttggcgaggccagcattgcc
agcggtgactatagcttggcgacgggtcaatacagtcgtgcccttggtgcagagagcacc
gccctaggcgagaacagcactgcctctggcgtacgcagtgtcgccctggggcaaggctcc
gaggcaactgaagcctataccgtgtcggtcgggacaagtacctatcagcgtcgcattgtc
aacgtggccgatggtgtggccgatagcgatgccgccaccgtcgggcaaatgaaggcggcg
gatgcgacgctgcaggatcatatcgatgccgaggccgccgcccgcgctgccgccgatacc
gccatgcagaccgatatcggcgccttgcaggatcaggccctcggcaccagctggaccgcc
ggttccaatgatgtggccgccagcgccagcggtagcggttccaccgctctgggcagcggc
gcttcggcccgaacccgcgataccgccatcggttccaatgctaccgtcagtgccgacggc
agcgtggcattgggggcggatacgacggtggcctcggagaacagcgtggcggtgggggcc
gactcctcggtggcggccggtgccgcaggcggggtggctctgggtcagaacgccagcgtc
gccagcggtgccaccggcagtgtggcgataggacaggattcggtggctgacgaggccgat
accgtgtcggtcggctccagcggcaacgagcggcgggtgaccaacgtcgccgatggcgtt
aatgccaccgatgcggtcaacgttcagcaacttcagcagttctcggcctccaccagcggt
gcgatcaaccgtttggatagtcgtatcgataacctgagccgtgatgctttttccgggatt
gccgccgtggccgcgatcgcgggcatcccggcgccggcgcagggcaaacgcacctcgctg
gggatcggctatggtaactacaagggagagaatgccatagccgtcggattcaaatccgat
attaccgacaatatccgtatcactaccgccatagcccattccaacagcgatgtaacgacc
agtgccggtgtcggctggagttggtga
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