Syntrophotalea carbinolica: Pcar_0160
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Entry
Pcar_0160 CDS
T00285
Name
(GenBank) ligand-gated TonB-dependent outer membrane channel
KO
K02014
iron complex outermembrane recepter protein
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_0160
Transporters [BR:
pca02000
]
Other transporters
Pores ion channels [TC:
1
]
Pcar_0160
BRITE hierarchy
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
OMP_b-brl_3
Plug
Motif
Other DBs
NCBI-ProteinID:
ABA87421
UniProt:
Q3A871
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Position
200382..202604
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AA seq
740 aa
AA seq
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MLGSTVGSCWAAPATTEAAQEGEASAVSLEAIEVSGKGGHVLFDAKTDEPWTETSLTREG
IESIGGVSQGNPVQALRTLPSVQTSSEEPYGYGHFFNNGVKIRGQRIKAPGSNLLIEGLQ
VTGVPGSSQYLFDMENVEGLTLYKGGMPPSKSLAFTTNAGLIDYRLRRPAEEAGAFFEQS
IGSFDYQRSFLRLDSGRLPGGTRAFASYSFTDADKWHGEGQSPDWRHNLDFGLTHEFGKR
VKLELFGNYNSIKAHDFRSLSYDQARHLDQYDKYSYNSELTGNAAEDIRYYDYNRHQFEG
YSALANLEIRLTEKSRFSVKPYFNKTQGYWMVGVTEPVNGKKTPVVRKWEMNYHRLGVVA
QYDAELPLFDLTAGYWYHEQERPGPPTKWKRYLVTSGGLEYAGYSLLSDNSKHIIHSPYL
QLGRTFGRLHLTGGVRYLYEEFGEIESYYFPGGVKTYDPLASVGRKYIDKVLPFAGISFD
LSESANIYFTYGRNVGRTAFPAYPSYVMRRGKFAAAGVSLSDLWSNVDLEVSDHYDLGAR
FDFGRWYLNPVLFYSRHFDKAVNIYDTTSGLLVNQNVATARSYGAELEMGVHVMDNLLLA
ANAFYNNFEFEKNIEALSSGKLDVKGNQIADTPMFGASFMADYRLGDFSINPVVRYTGRR
YGDVLNEEPLSSYWLVDLNLAYRLKDLWGLKETRLKLNFLNLFDKKYIGAMDASDDTQPG
SMAYYQGAPFTMVFSISFRI
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
ttgctaggcagtacggtgggatcctgttgggcagctcctgcgacgacggaagcagcgcag
gaaggcgaggcttcagccgtcagtctggaggccatcgaggttagcggcaagggcgggcat
gtgctgttcgatgccaagacggacgagccgtggaccgaaaccagtctgacccgcgagggc
atcgaaagtatcggcggcgtcagccagggcaatccggtgcaggcgctgcgcaccctgccg
tcggtgcagaccagcagtgaagagccctacggctacggtcactttttcaacaacggcgtc
aagatacgcgggcagcgcatcaaggctcccggttccaatctgctcatcgaggggctgcag
gtcaccggcgtgcccggcagcagccagtacctgttcgacatggaaaacgtcgaggggctg
accctgtacaagggagggatgcccccctccaaaagcctggccttcaccaccaacgccggc
ctgatcgattaccggttgcgccggccagccgaggaggcgggcgcatttttcgaacaatcc
atcggctccttcgattaccagcgttcctttctccggctcgattcggggcggcttcccggc
ggcacgcgggcatttgcctcctacagctttaccgatgcggacaaatggcatggcgaaggg
cagagcccggactggcggcacaatctcgatttcggcctgacccacgagttcggcaagcgc
gtcaagctggaactgttcggcaactataacagcatcaaggctcacgacttccgatccctc
tcctatgaccaggcccggcacctcgatcagtacgacaagtacagctacaacagcgaactc
accggcaatgccgccgaggacatccgctattacgattacaaccgccaccagttcgaaggc
tattccgcactggccaacctggagattcgcctgacggaaaagagccgcttttccgtcaag
ccgtatttcaacaagacccaggggtactggatggtcggcgtgacggaaccggtgaatggc
aaaaagacccccgtggtacgcaagtgggagatgaattatcatcgccttggcgtggtggct
cagtacgatgccgaactgccgctgttcgatctgaccgcaggctattggtatcacgagcag
gaacggcccggtccgcccacgaaatggaaaaggtaccttgtgacctccggcggcctggag
tacgccggttattcgctgctgtccgacaacagcaagcacatcattcacagcccttatctg
caactcggccgcactttcggtcgtctgcacctgaccggcggcgtgcgctatctgtatgag
gaattcggcgaaatcgaatcctattacttccccggaggcgtcaagacctacgatcccctg
gcgagcgtcgggcgcaaatacatcgacaaggtgctgccctttgccggcatttccttcgat
ctgtccgagagtgccaatatctacttcacctacgggcgcaacgtcggccgcacggctttt
ccggcctatccctcctacgtgatgcgtcgcggcaagttcgctgcggccggcgtcagcctg
tcggatctctggagcaacgtcgatctcgaggtttccgatcattacgatctgggggcgcgg
ttcgatttcggccgctggtacctgaatccggtactgttctattcccggcatttcgacaag
gcggtgaatatctacgacaccacctccggattgctggtcaaccagaacgtcgccaccgcc
cggtcctacggggccgaactggaaatgggcgtccacgtcatggacaacctgctgctggcc
gccaacgccttttacaacaacttcgaatttgaaaagaatatcgaggccttatcgagcggc
aaactcgatgtcaaaggcaatcagatcgccgatacccccatgttcggcgccagtttcatg
gccgattaccgcctgggcgacttttccatcaaccccgtggtgcgctataccggccggcgc
tacggcgatgtcctgaacgaagagccgctcagctcttactggctggtcgacctgaatctg
gcctatcgcctcaaggatctgtgggggctcaaggaaacccggctgaagctgaatttcctc
aacctgttcgacaaaaaatatatcggcgctatggacgcctccgacgatacccagccgggc
agcatggcttattatcagggcgcgccttttaccatggtgttttcgatttccttccggata
tag
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