Syntrophotalea carbinolica: Pcar_0187
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Entry
Pcar_0187 CDS
T00285
Name
(GenBank) protein of unknown function, DUF490-containing
KO
K09800
translocation and assembly module TamB
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_0187
Transporters [BR:
pca02000
]
Other transporters
Pores ion channels [TC:
1
]
Pcar_0187
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
ABA87448
UniProt:
Q3A844
LinkDB
All DBs
Position
complement(234436..238362)
Genome browser
AA seq
1308 aa
AA seq
DB search
MKRYVLHILGGLVLLGTLAFVFGCYWVMATAGGSAWLIRTVASRMPETVAVQTVEGRLTD
ELRLSGLEVRWTGGTATIGRLTWRWRAAGLLHRNVRIRSLNLEDVTLVTIPEKDQPREPL
DLAWPELPGWMQKIHVALDDVQIKRLRWQQPDGPSFYLQGLAAKARWTGRRLRIPIVTAL
SDAGAWTARAAIDWHQPGLRLKGAALTKPDTQTAVPLILALTLQPGEQPGSLTGTLHAGA
QAPAAGILQLATPFVVTPTDLRLDNFDLRSLSSTGSLHGKVRLDWAEPKPRLELSADLKN
LDLATLAGQTTHLDGHLTLKADPDAYAGTLALNNRATQWRDLRLETSFSGNRQNLDLTDL
NIHGLDGTIDGDANVRWTPQLSIRGKLSGHDLNPQRAGLAWPGNINLQAEGVWSRLDQGG
MSARIDARLLPSTLRDAPLQGQIRARLQNEDVQIDTLQLQSRGLDLTARGRLQQRIDFAA
RVDDLASLVPELTGAMQGRGWIRWRNQQVAGELNGSGRALQHGQLGVRNLRFSAALAANR
SGSLEADLTGLQYNDVQISALSIRGNGRPEQHSLSARITLPRQTQLKLTAAGGYEKSAWQ
GSVTELTLRDAIDTLNLADPAALSVSQKGLKLAALRLTGTSGEALSAAAQIQYAPLIGRG
QLAWEQLRLAHAQAWLDGTKITGNSSGNASWEQTADGAFALLADLKTAGSLEREGRQLHL
AGAEASLSWTPARLQAELHADLKQGGRLQGRIQGGRSTSMTLPEQADWQWLCRDLDLQLL
APWLPSGIAIQGILSGQSTGKLLPGRQLIADGRITVTGGQIATDKEQGQITVPVQNAELN
WNWRGEELSGQTEVQLGDYGHLNGSFRLPIPARMPVKPAQQGALDIIIDGRSTELGLFAA
LMPGAVQESRGRVEIKLRGDGTWQQPQLNGQVQLLEAGAYLPIAGLELQKVNILARLDGD
RILLDNLSLQSGKGTLRGKGSLQLHDWKPGNYNVTLKGQGVQLVNLPEIQIQADPDLLIT
GSTSELKVTGTVKLSEVMIRDNKKPSLITPSDDVVMVGEQSPEKPSAEFPIQADIRLLLG
DHVLVKASGLDARLTGELHLSSIDSNALTANGRIAVAEGMYAAYGTRLDITRGNLLFNGP
LAQPTLDIVALRTVGKIKAGVQVSGTPRLPVVKLTSEPAMSDSDRLAYIVLGRASARNAG
EADLLMTAGGLLLSQGESVVMRDRLKRQLGVDVLGFETGSATGQDDVSSSMLTIGKYLSP
SLYVSIGQSLFANTQEFRLRYSLGKHWQLESTTGEESGVDLYYKIEFR
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacgctacgtactccatattcttggcgggctggtactgctgggcactctggccttc
gtgttcgggtgctattgggtgatggccacagccgggggctccgcctggctgatccgtacc
gtggcaagccgcatgccggagaccgttgccgtccagaccgtcgaggggcgtcttaccgac
gaactcagattgtccggcctggaagtgcgctggaccgggggcacagcgaccatcggccgg
ctgacatggcgctggcgcgccgccgggctgctgcacagaaacgtgcgcatccgctctctg
aacctggaagatgtgacccttgtcacaatccccgaaaaagaccagccacgcgaacccctt
gatctggcctggcccgagctgcccggctggatgcagaaaatccacgtcgccctggacgat
gtgcagatcaagcgactcagatggcaacaaccggatgggccctcgttttatctgcaagga
ctggccgccaaggcccgttggacgggacggcgactgcgcatcccgatagttacggcactg
agcgatgcgggggcatggaccgcccgtgccgcaatcgactggcaccaaccgggactgcga
ctaaaaggggcagcgctgaccaaaccggacacgcaaaccgctgtgcccctgattctggcg
ctgaccctgcagcccggggagcaacccgggtcgctgaccggcactctgcatgccggcgca
caggcgcctgcggcaggtattctgcaactggccacgccctttgtcgtgacaccgaccgac
ctgaggctggacaacttcgacctgcggagcttgtcatcgacaggctccctccacggcaag
gtgcgccttgactgggccgaacccaaaccccggctcgaactctccgccgacctgaagaac
ctggatctggccacactggcagggcagacgacccatctggatggacacctgacgctgaag
gctgacccggatgcctatgcgggaacgctggcactgaacaaccgggcgacgcaatggcgg
gatctccggctcgaaacctccttcagcggtaatcgccagaatttagatctcaccgatctc
aacatccatgggctggatggcaccatcgacggcgatgccaatgtgcgctggacaccgcaa
ctgagcatccgcggcaaactcagcggccatgacctcaacccccaacgtgccggtctggcc
tggccgggcaacatcaacctgcaggccgagggcgtatggagtcgcctcgatcagggcggt
atgagcgccaggattgacgcccgtttgctgccgagcaccctgcgcgacgcccccttgcag
gggcaaatccgggcccggctgcaaaacgaggacgtgcagatcgacaccttgcagctgcaa
agccggggcctcgacctcaccgcacgggggcgactgcagcagcgtatcgactttgccgcc
agggtcgatgacctggccagccttgtgccggaactgaccggagccatgcagggacgcggc
tggatacgctggcgcaaccaacaggtggccggcgagctcaacggcagcgggcgcgccctg
caacacggccagctcggggttcgaaatcttcgtttttccgccgccctggcagcgaaccgc
agcggctccctcgaggccgacctgacggggttgcagtacaatgatgttcaaatttcggcc
ctttccatccgcggcaacggccgtcccgaacagcatagcctgagcgcccgcatcaccctt
ccacggcagacacagctgaagctgaccgccgccggcggctacgaaaaatccgcatggcaa
ggatctgtgaccgaactgaccctgcgggatgccatcgacaccttgaacctggctgacccc
gccgcattgagcgtgtcgcaaaaaggactcaagcttgccgcactgcgcctgacaggcacc
tccggtgaagccctctcggcagcggcgcaaatccaatacgcgcccctgatcggccgaggg
caactcgcgtgggaacaacttcgcctggcccatgcgcaagcctggctggacggcaccaaa
atcaccggtaacagcagcggcaacgcctcatgggaacaaaccgccgatggagctttcgca
ctgcttgccgatctaaagaccgctggttccctcgagcgcgagggacggcaactgcacctg
gccggggccgaagccagcctgtcatggacccccgcgcgattacaggccgagctccatgcg
gacctcaagcaagggggacggctgcaagggcgtatccagggcgggcgcagcacatccatg
accctgccggaacaggccgactggcaatggctctgccgggatctggacctgcaactgttg
gcgccctggctgccctccggcatcgccatccagggtatcctctccggtcaatccacagga
aaactgctgcccggccggcaactgatcgccgacggccggataaccgtcaccggcggtcag
atcgcgaccgacaaggagcagggacagatcaccgtcccggtacaaaatgccgagctgaac
tggaactggcgcggtgaggagctttctggccaaaccgaggtgcaattgggggattacggt
catctgaacggcagtttccgactgccgattccggcgcgtatgcccgtaaaaccggcgcaa
cagggggcactggacataatcatcgacggccgcagcaccgagttggggctgtttgccgcg
ttgatgcccggagcggtgcaggaatcccgcgggcgcgtcgaaatcaaactgcgcggagac
ggtacctggcaacaaccgcaactgaatggacaggtacagctgctcgaagccggcgcctat
ctgcccatagccggcctggaactgcaaaaggtgaatatcctggcacgtcttgacggggat
cgtatcctgctcgacaacctgtccctgcaatccggtaaaggaaccctgcggggcaaaggc
tccctgcagttgcacgattggaaacccggcaactacaacgtgaccctgaagggccagggc
gtgcaactggtcaatctgccggaaatacagatacaggccgatccggacctgctcattacg
ggttcaacctcagagctgaaggtcaccggcactgtcaaactgtcggaagtcatgatccgg
gacaataaaaaaccgtcgctcatcactcccagcgacgatgtggtcatggttggcgaacag
tccccggaaaaaccttccgccgaattccccattcaggccgatatccgactgctgctggga
gaccatgtgctggtcaaggcctcaggcctcgacgcccgcctgacgggagaactgcactta
agctccatcgacagcaatgccctgaccgccaatggacgcatcgccgtggccgaagggatg
tacgccgcctatggcacccggctggacatcacgcgcggcaatcttctgttcaacgggccg
cttgcgcaaccgaccctggatatcgtcgccctgcgcaccgtcggcaagatcaaggcgggg
gtccaggtcagcggcacgccccgcctgccggtggttaaactcacttccgaaccggccatg
tccgacagcgaccggctggcgtatatcgtactgggccgggcttcggcgcgcaatgccggg
gaagccgatctgttgatgaccgccggcgggctgctgctttcccagggggaatcggtggtc
atgcgcgatcgcctcaaacggcaactgggagtcgatgtcctgggctttgaaaccggcagc
gccaccggccaggacgatgtctccagctcgatgctgaccatcggcaagtatctcagtccc
agcctgtatgtcagtatcggccagtccctgttcgccaatacccaggaattccgattgcgc
tacagcctgggcaagcactggcaactggaatcgaccaccggcgaggaaagcggcgtagac
ctgtattacaagattgaattccggtaa
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