Syntrophotalea carbinolica: Pcar_0195
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Entry
Pcar_0195 CDS
T00285
Name
(GenBank) ligand-gated TonB-dependent outer membrane channel
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_0195
Transporters [BR:
pca02000
]
Other transporters
Pores ion channels [TC:
1
]
Pcar_0195
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Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ABA87456
UniProt:
Q3A836
LinkDB
All DBs
Position
complement(249191..251152)
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AA seq
653 aa
AA seq
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MTKRCVWMSAWVLAGCLLTAWPVQAAEVTENLDDEQVFTLGEVIVSGEEQVVNLATTVTE
VTAEDMKQRGARTLAEALEMLPGVDVARSSSKNESFVQIRGFSDQDVKILIDGVPVYEQY
SRQLDLAQIPTSSISKITVTKGASSVLYGANALGGVINIITKKATSKPSATATAAWGDYG
TEEYSFGVGAPIGKFNYWLGYSYRHSNGWKLSDDYDEDWWGSKEDDGGKRDFSDYIQHNI
NAKIGFEPDADTSLYLTFDYHDNEKGVPTRKWYFPQWEQWHVNLVGQKKFTDWLKIKARV
FYADHQDTLFFPKWNELSAYDNYSVGGELQSFLDFGRWSFVKFGASFQRDNCQQSEKVID
DGFWTDAGDYEADTYTFALEDEIKPLEWLAIVVGASYDYYDPREAGDMPVPDSIDSFNPQ
IGAVVTLTEMTSLHGSVGRKIRFPHLKELYSEMAGGNPDLDPQETITYEVGLTHAFTDTV
TFSVSAFYNDIDNLIDQIDVMVDGEELGVYINIGEATTKGVEVALGADVTDDFWVGLNYT
YMRTEDKDKGRELEGRPRHRVNLDMRYLFPFGLTTSMQLSYTNRQFYDDKYNGWTRSPDF
FLLNARVEQRVGELWGVEGNAFFEINNLTDRDYYEVGRPTPGRNFLAGLSFTY
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaaagatgtgtttggatgtcggcatgggtgctggccggttgtttactgaccgca
tggccggtgcaggctgcggaagtaacagaaaacttggatgatgagcaagttttcaccctg
ggtgaagttatcgtcagcggcgaagaacaggtcgttaacctggccaccaccgtcaccgaa
gtaaccgccgaagacatgaaacagcggggcgcacgaaccctggccgaagcgctggagatg
ttgccaggcgtggatgtcgctcgcagttccagcaaaaatgaaagtttcgttcaaatccgt
ggcttcagcgatcaggacgtcaaaatcctgattgatggcgtgccagtttatgagcaatat
tcccgccagttggaccttgcccaaattccgaccagttcgatttcaaagattaccgtcaca
aagggtgcctcttcggttctctatggcgccaatgcattgggcggcgtcatcaatatcatc
accaaaaaagccacaagcaaaccttccgctacggcaaccgctgcctggggcgactacggg
actgaggaatatagtttcggagtgggagcgcccatcggcaaattcaattattggcttggg
tacagttaccgccattcaaacggctggaaattatctgatgattatgacgaagattggtgg
gggtccaaggaagatgacggaggaaaacgtgattttagcgactatatccagcacaatatc
aatgcaaaaatcggttttgaacccgacgccgacaccagtctatatctaacctttgactat
catgataacgaaaaaggggtccctaccagaaaatggtacttcccccaatgggagcaatgg
catgtcaacctcgtcgggcaaaagaaattcaccgattggctaaaaattaaagctcgtgtt
ttctatgccgatcatcaagacacactgttctttccgaaatggaatgagttgtcggcatac
gacaactattcggtcggtggagaactccagagtttcctggacttcggccgttggagtttt
gtcaaattcggtgcttccttccagcgtgacaactgccaacaaagcgaaaaagttatcgat
gacggtttctggacagatgccggggattacgaagccgacacctacaccttcgctcttgag
gatgaaatcaaacctctcgaatggttggccattgttgtcggtgccagttatgactactac
gatccacgtgaagccggtgatatgccagtgccggatagcatagattcctttaatccccaa
atcggcgcagtggtgacgctgaccgaaatgacaagtctacacggttcggtcggcagaaaa
atccgtttccctcatctcaaggaactttacagcgagatggcaggcggcaatccagacctc
gatccccaggaaaccatcacatacgaagtcggcctgactcatgcgtttaccgacaccgta
acattttccgtatcggccttttataacgatattgacaacttgatcgaccagatcgatgtc
atggtggatggagaagaattaggcgtatatatcaatattggcgaagcaacaaccaaaggg
gtagaggtcgccctgggggctgatgtcacggatgatttctgggttggccttaactacacc
tacatgagaaccgaggataaagataagggacgagaacttgaaggccgtccccgccatcgg
gtcaatctcgacatgcgttaccttttccctttcggcctgacgacttcaatgcagctctcc
tataccaatcggcagttttacgacgacaaatataatggctggaccagaagcccagacttt
ttcctgttaaacgctcgcgtggaacaacgagttggcgaattgtggggagttgaaggcaat
gcattttttgagattaacaatctgaccgaccgcgattattacgaagtaggcagaccgaca
cccggccgtaacttcctggccggcctcagcttcacttattaa
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