Syntrophotalea carbinolica: Pcar_0323
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Entry
Pcar_0323 CDS
T00285
Name
(GenBank) ribonuclease D, putative
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pca03016
]
Pcar_0323
Enzymes [BR:
pca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
Pcar_0323
Transfer RNA biogenesis [BR:
pca03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Pcar_0323
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
ABA87583
UniProt:
Q3A7R1
LinkDB
All DBs
Position
404724..405851
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AA seq
375 aa
AA seq
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MSLPPILVDDVSIARLAQELRDEAVIAVDLEADSLHSYQEKVCLLQISTSTRTVLVDPLA
VEDLAALAPVLADPTIRKIFHAADYDIRCLFRDFRIEVQGLFDTMIACQMLGEKRVGLAD
VLAKYLDVELDKRYQRADWSKRPLEEGMILYAMEDTCHLHRLTEILEGRLRDMGRLSWAE
EEFALLQKVRHSENNGPLFMRVKGAGLLERKQLAVLEQLLQWRDEEACRRDRPAFKVVGN
KTLLGLAQIMPGSLREAKGIEGFSPRLADRYGRALIGVVCKAAAIPREEWPVYPRGERRE
RDPAVEGRMKDLKQVRAAMAEELDMDPGILVNNAQLEGVARACPADMDQLTELGILKNWQ
REVLGEGLLGALNRG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgccccccatactggtcgacgacgtatccatagcccgattggcgcaggagttg
cgcgatgaggccgtcatcgccgtcgatctcgaagccgattccctgcattcctatcaggaa
aaggtctgtctgctgcagatatccacttcgacccgaacggttctggtcgacccgctggcc
gtggaggacctggccgctctggcaccggtattggccgacccgactattcgcaagattttt
catgccgctgattacgacatccgttgcctgtttcgggatttcaggatagaggtccaaggt
ttgttcgataccatgatcgcctgccagatgctcggtgaaaagcgtgtcggtctggccgac
gtgctggccaaatatctggatgtcgaactcgataagcgttaccagcgggccgactggtcg
aaacgtccgctggaggagggcatgatcctttacgccatggaggatacctgccatctgcat
cggctgacggagatcctcgaggggcgcctgcgggacatgggacgtttgagctgggccgag
gaggaattcgcgttgctccagaaggtgcgccattcggaaaataacggtccgctgtttatg
cgcgtgaaaggcgccggcttgttggaacgcaagcaactggcagtgcttgaacaattgttg
caatggcgtgatgaggaagcatgccgccgggatcgccctgccttcaaggtcgttggcaac
aaaaccttgctcggtttggcgcaaatcatgcccggcagccttcgggaagcgaagggcata
gagggcttttcgccgcggctggccgatcgttatggtcgggccttgatcggggtggtgtgc
aaagccgcagccattcccagagaggagtggccggtctatccgcgcggcgaacgccgtgag
cgggatcccgccgttgagggacgcatgaaggatctcaagcaggtgcgtgcggccatggcg
gaagaactcgatatggatcccggtatcctggtcaataatgcgcaactcgaaggggtggcc
agggcctgtccggccgacatggatcaattaacggaactcggcatattgaagaactggcag
cgggaagtgcttggtgagggcttgctgggcgcattaaaccgtggttga
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