KEGG   Syntrophotalea carbinolica: Pcar_0396
Entry
Pcar_0396         CDS       T00285                                 
Symbol
mshQ
Name
(GenBank) type IV pilus biogenesis protein MshQ, putative
  KO
K12287  MSHA biogenesis protein MshQ
Organism
pca  Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:pca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pca02044]
    Pcar_0396 (mshQ)
Secretion system [BR:pca02044]
 Type II secretion system
  MSHA pilus biogenesis protein
   Pcar_0396 (mshQ)
SSDB
Motif
Pfam: DUF6701 Laminin_G_3 Pentaxin
Other DBs
NCBI-ProteinID: ABA87656
UniProt: Q3A7I8
LinkDB
Position
484521..488441
AA seq 1306 aa
MICRTGAFGNRLPGFPAAFLVLLLMVVGMAWPRYAYADCSPYVGAMVINEVYELGGEAWV
EVRLLDDSVPASEYQQWSIQVCAKGGGGGHCGTYDIADGEVLYPDTYPYWIRLNVSDKDV
NLQRNGGMDVVLEDENGKAIDYLSVNNYDDHAPYDHWPYCNSFLYPTTTGALDSDLKGVY
RDPDGTGPWLQLGESGANGEPSEGYDNNTMEGLVAHYALEENANDSSINGHDGSSQGTVS
YERAVICDGVVLDGSGYLMVPDNDAFDLRKSLTVSAWIRADSLSVSGHDNLYTILSKDTN
YEFHVRGDGSLYWWWSGGSFATGAGLVEPGEWYHFAAVYSWSDKIMYIYLNGQQVASYVY
SSQFTANTDPLYIGTDKGNSTGDWPERRFYGAIDEVHIYNNALSQASIAELMNQTNPCGL
PVPLAEWRFDECSYDGSAALAEDAQGSYDATVQGTVTSEAEAVVGRSATLDEYTDAFTLN
TDVPMPDDWTVSVWFKMPFVNDNGAQYHVLGAMAGGGNDLLWVDDTSNYRWGCWAGYDYD
YGLFSFASLADGWHHLVAVGSYGKTRLYIDGSYRDTIALQGNGNLHYLGTSYEKVNGREE
GFRAPLDEFLVFDGVLTLPQIQTLYQLQAEGRNLDGTLRSDIICGPAIDHFEIVHDGSAL
TCAPETVTVRACADDADPCTPYTDDVEITLSPSGWIDGDTQTLSAGSGTFRLRHTTAETV
TLSVTGNPAADQSVQCVDAGGGDSCSMVFHESGFLFDVSDMQACTDEEGITFSAVRADAT
AEHCIGDDSFAGTTRDVAFWSTYQEPGTGTLALVVNDTTVAGADPGTGVSLTFDSEANST
LKVRYSDAGRLLLSARFTGSGEESGLVMEGSDSFVVTPDHLRVRASTDGTTLLDNTTSTG
DPLWPAGEDFEVEVAGVCADGTVTPNFAAATTLAATAGNPAAGTFTGGPFAAVDYIDGVV
SDSASYSEVGTVTLQAQAANYLGSGIAVTGSATIGRFTPHHFTASVNSPSFATGCSSGGF
TYVGQAFAYADAPVITVTAKNKQGDTTANYTGEWWKIAGTTLSGKTYSAADGSLDVSGIP
AADPVVSDIGGGMGLLSFDAGSGLSFVRSDPVAPFDADISLAINVFDADGIAADANPVSF
GEATAGNGIAFDAGKDMRWGRLAMKNAYGSELVALSMPMRSEYFTGDAFVQNLEDGCTAL
ALSQLTLNNGTTSVSGDQAIAVGSGSSSAALLSPLLAGDAGLTFSAPGSPGYIDVKADLS
LLPWLRYDWDGDGSHDDDPTARASFGIYRGRPGMIYIRESFRQAGP
NT seq 3921 nt   +upstreamnt  +downstreamnt
atgatatgccggacaggtgcattcggaaacaggttaccgggtttcccagcggcgtttctg
gtgctgctgcttatggttgtcgggatggcatggccccgctatgcctacgccgattgttcc
ccttacgtgggggccatggtcatcaacgaagtctacgaactcggcggggaagcctgggtg
gaggtgcgtttgctggatgactcggtaccggcgagcgagtaccagcagtggtccatccag
gtatgcgccaagggcggtggcggcggacactgcggaacctatgatattgccgatggcgaa
gtgctttatccggacacttacccctactggatccggttgaatgtcagtgataaggacgtc
aatctgcagcgcaacggcggtatggatgtggtgctggaggacgaaaacggcaaagccatc
gattacctgtccgtcaacaattacgacgaccacgcaccttacgatcactggccatattgc
aatagttttctttaccctaccaccaccggggccctggattccgatctcaagggtgtttat
cgcgatcccgacggcaccggtccctggctgcagttgggggagtccggcgccaatggcgaa
ccttccgaggggtatgacaacaacaccatggagggcctggtggcccattatgcccttgag
gaaaacgcgaacgacagcagtatcaatggccatgacggcagcagtcaggggacggtaagc
tacgagcgcgccgtgatctgcgatggcgttgtgctggatggcagcggttatctgatggtg
cccgacaacgatgccttcgatttgcgcaagtcgctgaccgtctcggcctggattcgggcc
gacagcctcagtgtcagcggccatgacaacctgtataccattctttccaaggacaccaat
tacgaattccatgttcgtggggacggttctttgtactggtggtggagcgggggcagtttc
gccaccggggccggtcttgtcgagccgggcgagtggtatcatttcgctgccgtttattcc
tggtccgacaagatcatgtacatctacttgaacggccagcaggtggccagttatgtttac
tcgtcccagtttacggcaaacaccgatccgctctatatcggtaccgacaagggcaacagt
accggggattggcctgagcgccgcttttacggcgctatcgacgaagtgcatatctataac
aacgccctgagtcaggcgagcattgccgagttgatgaaccaaacgaacccctgcggcttg
ccggttccgctggcggagtggcggttcgacgaatgctcctatgacggttccgctgcgctg
gccgaggatgctcagggcagctatgacgccaccgtacagggcacggtaaccagcgaggcg
gaggctgtggtgggccgttccgcaacgctggatgaatacaccgatgcctttaccctcaac
accgatgtgcccatgcccgatgactggacggtcagtgtctggttcaaaatgccgttcgtc
aacgataacggagcgcagtatcatgtgttgggtgccatggccggcggcggtaacgatctc
ctctgggtggatgatacaagcaattatcgatggggttgctgggccggttacgattatgat
tacgggttgttttcttttgcctccctggcggacggctggcaccatctggtggcggtcggc
agttacggcaagacccggttgtatatcgacggcagctaccgcgacaccattgccctgcag
ggcaacggtaatctgcattatctgggcacctcttacgaaaaggtcaatgggcgggaagaa
gggtttcgcgcgccgctggatgaatttctggtgttcgacggggtgcttaccctcccccag
atccagaccctctaccagttgcaggccgaaggccgcaatctggacggcaccctgcggtcc
gatatcatatgcgggccggccatcgatcatttcgagatcgttcatgacggctcggctttg
acctgcgcgccggaaacggtgacggtgcgggcctgtgccgacgacgccgatccctgtacc
ccgtataccgatgatgtggagatcacgctttcgccttccggctggatcgatggagacacc
cagaccctctcggctggaagcggcactttccggctgcggcataccaccgcggagaccgtg
accctctccgttaccggcaatccggccgcggatcagtctgtgcagtgtgtcgatgccggc
ggcggggattcatgcagcatggtgtttcacgaatccggctttctgttcgatgtgtccgat
atgcaggcctgtaccgatgaggagggaatcaccttttccgccgttcgcgccgatgccacg
gccgaacactgcatcggtgatgacagcttcgcgggcacgacccgcgatgtggctttctgg
tccacttaccaggagccgggaacgggtaccctggctttggtggtaaacgatacgacggtc
gccggagccgatccgggcacaggggtgtctttgaccttcgattcggaagccaacagtact
ctcaaggtgcgatactccgatgccggtcggttactgttgtccgcccgttttaccggcagc
ggcgaggagtccggcctggtgatggagggcagcgacagttttgtcgtgacgccggatcat
ctgcgggtgcgggccagcaccgacgggacaaccttgctggacaataccacgtccacaggt
gatccgctttggccggcgggagaggattttgaggtcgaagtcgccggggtatgcgccgat
ggcacggtgacgcccaactttgccgccgcgaccactcttgccgctacggcaggcaatccc
gccgccgggacttttaccggcggtccgtttgcggcagtcgattacatcgatggggtcgtc
agtgacagcgccagctacagcgaggtcggtaccgttaccctgcaggcgcaagcggccaac
tatctcggcagcggcatcgccgtgaccggcagtgcgaccatcggtcgttttacgccgcat
cactttaccgcctccgttaacagcccctcgtttgctacagggtgcagcagcggtgggttt
acctatgtcgggcaggctttcgcttatgccgatgccccggtgattacggttaccgccaaa
aacaagcagggagacacgacagccaactataccggcgaatggtggaagattgccggcact
accctttccgggaaaacctacagcgccgccgacggttccctcgatgtttccgggatcccg
gccgcggatccggtggtctccgatatcggcggcggtatgggcttgctgagtttcgatgcc
ggcagcggcctgagctttgtgcgcagtgatccggtggcgcctttcgatgcggatatcagc
ctggccatcaatgttttcgatgccgatggcatcgctgccgatgccaatccggtgtccttc
ggcgaggccaccgccggcaacggcatcgccttcgatgccggcaaggatatgcgctggggg
cgtcttgctatgaaaaatgcctacggttcggaattggtggctctttccatgcccatgcgc
agcgaatattttaccggggatgcctttgtgcagaatctcgaggacggctgtaccgccctg
gctctttcccagttgacgctgaataacggcacaaccagcgtcagtggcgaccaagccatc
gccgttggcagcggcagcagtagcgcagcgctgctcagcccgttgctggccggcgatgcc
ggtctgacattcagtgctccgggctcacccggctatatcgatgtgaaggcagatctgtcc
ctgttgccctggttgcgttatgactgggacggtgatggcagccacgatgacgatcccacc
gctcgggcaagtttcgggatttaccgggggcgtccggggatgatctatatccgcgagagt
tttcgccaggcggggccttga

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