Syntrophotalea carbinolica: Pcar_0428
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Entry
Pcar_0428 CDS
T00285
Name
(GenBank) aromatic hydrocarbon degradation outer membrane protein
KO
K06076
long-chain fatty acid transport protein
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_0428
Transporters [BR:
pca02000
]
Other transporters
Pores ion channels [TC:
1
]
Pcar_0428
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Toluene_X
OMP_b-brl
DUF2490
OmpA_membrane
DUF6850
Motif
Other DBs
NCBI-ProteinID:
ABA87688
UniProt:
Q3A7F6
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All DBs
Position
complement(520393..521661)
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AA seq
422 aa
AA seq
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MKKRVLPGLIAVTLMLFTPLTGWATNGMNMIGTGAVSAGMGGADVAVPAGCTAIAGNPAQ
LATTCNRVISVGGALMFPDMEDAPAGGSNVDNEFQVFPVPFIGYAQRLGTSRWSAGVGIF
AQGGMGVDFKDVEVNTAYYPGMKDDLMSEVGFVRFSPTVAYNVSDRLTMGASLFAGYATI
KYDFFPNTIGHKVKDLSSFTFSGRFGLSYQINDQWSVGATYTSESSIDFDDGELTQNFGP
MGKVKYDDVKMDGFTWPRQVEIGAAYRATPKLLLALDLSWINWSSAIKTVTVTASDPNGP
VPPGYEKLKVPFEMDWDDQFVVAIGAEYELTESFTVRAGYNYGNTPVTNVNLSPIFPALV
EHHATVGCTYTWKQWDFDFAYEHAFTNTETNDGDANPMTNPFYGSEVSHTMDTFSFMVSY
RF
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagagggttcttccgggtttgatcgccgtgacgttgatgctctttacgccgctg
accggctgggcaaccaacggcatgaacatgatcggaacgggcgcggtttccgccggcatg
ggcggggcggatgtggcggttcctgcgggttgcacagccatagcgggtaatccggcacag
ctggcgacaacatgtaatcgcgtcatttccgtaggcggcgcgttgatgtttcccgacatg
gaagacgcacctgccggcggaagcaacgtagacaacgaatttcaggtctttccggtgcca
ttcatcggttacgcccaacgcctcgggaccagccgctggtccgcaggggtcggcatcttc
gcgcagggcggcatgggtgtcgatttcaaagacgttgaagtcaatacggcctactacccg
ggcatgaaggacgatctcatgtccgaggtcggattcgtcagattttcacccaccgtggcg
tataacgtcagcgacagattgaccatgggggcaagcttgtttgcaggctatgccaccatc
aaatacgacttttttcccaacaccatcgggcacaaggtgaaagacctgagcagcttcacc
ttctccggtcgcttcggcctcagctaccagatcaacgaccaatggtcggtgggcgctacg
tacacatccgaaagctccatcgattttgacgacggcgaactcacacagaatttcggcccc
atgggcaaggtaaaatacgatgacgtcaaaatggacggtttcacctggccgcgacaggtc
gaaatcggcgcagcctaccgggccactcccaaactgctgctggctctggatctgagctgg
atcaactggagctccgccatcaaaaccgttacggttacggccagcgacccaaacggcccc
gtgccgccgggctatgaaaagttaaaggttccctttgagatggactgggacgaccaattc
gtggtggccatcggagcggagtacgaattgaccgaatccttcaccgtccgcgccggttac
aactacggcaacactccggtcaccaatgtcaatctgagcccgatcttcccggcccttgtc
gaacaccacgccactgtgggatgtacctacacctggaagcagtgggacttcgatttcgct
tatgagcacgcctttaccaacaccgaaaccaacgacggggacgccaacccgatgacgaat
ccgttctacggttccgaagtgtcccataccatggataccttcagttttatggtaagctac
cgtttctaa
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