Syntrophotalea carbinolica: Pcar_0492
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Entry
Pcar_0492 CDS
T00285
Name
(GenBank) ABC transporter, periplasmic substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
pca
Syntrophotalea carbinolica
Pathway
pca02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Pcar_0492
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_0492
Transporters [BR:
pca02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Pcar_0492
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
Lentivirus_VIF
Motif
Other DBs
NCBI-ProteinID:
ABA87752
UniProt:
Q3A792
LinkDB
All DBs
Position
complement(598796..599905)
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AA seq
369 aa
AA seq
DB search
MRRAFWGVSLFGILGLVAIGLALAPGCSKAKKETLRITCWGGYAKPYVADFQKLVKEKYK
VDVEVQITNPTDQDEFFMAVKNNTADLISPPIELPKIPRFYAYDEQTPYLQPVDINNIPN
LKNMMPVFRDDTTPIFAGKRYGVPYNCGPYGLAYNTDVIGTTPATWNILWEPRYAGKYTI
NNNFPKVNVWITALALGYDYADIFDIGNLDRDKVQQQLNVLAKNAKSLWDGAANPDEFPE
LSLATTWGFAAQQANLKGGNWLLASPKEGGTAWIDCWYVGAGAEDMTKTLAEEWINFMLD
PARQADVVKSQGVSPVIADVGELLDAKEQAMFHVGDENYFKSVALWRVMTEETEKAFNDM
WEEAKKHRE
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgagaagagcattctggggagtatcgcttttcggcatcctgggcctggtcgccataggc
ctggcattggctccgggctgcagcaaagccaagaaagaaaccttgcgcatcacatgctgg
ggcggctatgccaaaccctatgtggccgatttccagaaactggtcaaggaaaagtacaag
gtcgacgttgaggtccagatcaccaatcccaccgaccaggacgagtttttcatggcggtg
aaaaacaatacggcggatctgatctcaccacccatcgaactgccaaaaatcccgcgtttt
tatgcctatgacgagcagaccccttatcttcagccggtggatatcaacaacattcccaat
ctcaagaacatgatgccggtattccgtgacgataccacgcccatattcgctggtaagcgt
tacggcgtaccgtacaattgcggtccttacggcctggcctacaacacggatgtgatcggc
actactccagctacctggaatatcctatgggagccccgttacgccggcaagtacaccatc
aacaacaacttccccaaggtcaacgtctggatcactgcactggccctcggctacgactat
gcggatatcttcgatatcgggaacctcgaccgggataaagttcagcagcaactcaacgtt
ctggccaaaaacgccaagagcctctgggatggtgccgccaatccggatgagttccccgaa
ttatcgctagccaccacctggggatttgccgcccagcaagccaatcttaaaggcggcaac
tggctgttggccagtcccaaggaaggcgggacggcctggatcgactgctggtacgtcggt
gctggagccgaggatatgaccaagactttagccgaggagtggatcaacttcatgttggac
ccggcccgacaggctgacgtggtcaaatcccagggagtgtccccggtcattgccgatgtc
ggcgaactgctcgacgccaaggaacaagccatgttccatgtcggggatgaaaattacttc
aaaagtgttgccttgtggagggtcatgaccgaggaaacggaaaaagcattcaacgacatg
tgggaggaggcgaaaaaacacagggaatag
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