Syntrophotalea carbinolica: Pcar_0592
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Entry
Pcar_0592 CDS
T00285
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca03030
DNA replication
pca03410
Base excision repair
pca03420
Nucleotide excision repair
pca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pcar_0592 (polA)
03410 Base excision repair
Pcar_0592 (polA)
03420 Nucleotide excision repair
Pcar_0592 (polA)
03440 Homologous recombination
Pcar_0592 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pca03032
]
Pcar_0592 (polA)
03400 DNA repair and recombination proteins [BR:
pca03400
]
Pcar_0592 (polA)
Enzymes [BR:
pca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pcar_0592 (polA)
DNA replication proteins [BR:
pca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Pcar_0592 (polA)
DNA repair and recombination proteins [BR:
pca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Pcar_0592 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pcar_0592 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
WHD_BrxR
NYN_YacP
HHH
DUF5004
Motif
Other DBs
NCBI-ProteinID:
ABA87851
UniProt:
Q3A700
LinkDB
All DBs
Position
717655..720330
Genome browser
AA seq
891 aa
AA seq
DB search
MTDQAQRIYLIDGSSYIYRAYYAIRQLSNSKGLATNAVYGFTNMLLKVVRDEQPDHLAVI
FDAKGPTFRKEIYPEYKANRSAMPEDLRPQIPVIKELVKAFNMPALELEGYEADDIIATL
ARRFAERGMAVTVVTGDKDLMQVVSERVRLLDTMKDQVVGLAEVAERFGGTPDKVVEVQA
LAGDSSDNVPGVPGIGEKTARTLIAQFGTLENLLANIDQVSGKKRQENLRQFGEQARLSK
KLVSLVDDLSLDVDYDNFDLSEPNHEALTHLFKELEFHKLLQEFSSDERASGEHYQTVVT
EDQLDDLIHALKKAGRFAFDTETTSLVATRADLVGISFAIKPGEGWYLPVGHRYLGVPEQ
LDRALVIDKLRPLMADTQLAKIAQNAKYDLLVLRRAGLEVAGLSCDTMLASYLANPAAKS
HGLDTLASELLGYRTIGYTEVTGKGKKQIGFEEVEIEKATVYATEDADITLRLADKLEPQ
LAETGQGELFRTVELPLVTVLSDMEWQGVRIDADFLKGLSADMKTRLATLEGEIHELSGR
SFNVASPKQLGEVLFEHLKLPRGKKTKTGWSTDVEVLTNLAEEHPIAARVLDYRSVAKLK
STYCDALPKLIHPDTGRIHTSFNQAVTATGRLSSSDPNLQNIPIRTEEGRRIREAFVPAE
GNLLLAADYSQVELRILAHMADEPALKESFAHGEDIHARTASEIFGVFLELVTPEMRRQA
KTINFGVLYGMSAFGLAKSLGIARKEAQTYIDNYFARYPKVLEFMEAKKAEAREKQYVTT
LLGRRCAVPEIASKNGAVRGYAERNAINYPIQGSAADIIKVAMLRIHERLKAEKLETKMV
LQVHDELVFDMPAAEQAAVENLVREQMEHAFELDVPLLVDMGVGRNWREAH
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaccaggcccagcgcatttatcttatcgatggttcttcctacatctatcgggca
tattacgccatccgccagctgtccaattccaaagggcttgcgaccaatgccgtgtacggg
tttaccaacatgttgctcaaggtggtgcgcgacgagcagcccgatcacctggcggtgatt
ttcgatgccaaggggccgacctttcgtaaggaaatttatcccgaatacaaggccaaccgt
tctgccatgcctgaagatctgcgcccgcagatcccggttatcaaggaactggtgaaggct
tttaacatgccggctctggaacttgaaggttacgaggcggacgatatcatcgccaccctg
gcacggcgcttcgccgagcggggcatggcggttaccgtggtaaccggcgacaaggatttg
atgcaggttgtcagcgagcgggtgcggctgctcgataccatgaaagatcaggtcgtcggt
ctggctgaagtggccgagcgttttggcggtactcccgataaggtggtggaggtgcaggcc
ctggccggcgacagttcggacaatgtgccgggagtgccgggaatcggtgaaaaaaccgcg
cgtaccctgatcgcgcaattcggcacgctggaaaatctgctggccaatatcgatcaggtg
tcgggtaaaaagcgccaggaaaacctgcgccagttcggtgaacaggcccgtttgtccaaa
aagctggttagcctggtggacgatctttcgcttgacgtcgattacgacaactttgacctt
agcgaaccgaaccacgaggctcttacccatctgttcaaggaactggagtttcacaagttg
ctgcaggaattctccagcgacgagagggccagcggcgagcattaccagacggtggttacg
gaagaccagctcgatgatctgattcatgccttgaaaaaggccggccgcttcgcgttcgac
acggagaccaccagtcttgtcgccacgcgtgccgacctggtcgggatatcctttgcgatc
aagcccggtgaaggctggtatctgccggtggggcaccgctatctgggggtaccggagcaa
ctggatcgggcgttggtgatcgataaattgcgaccgctgatggcggatacgcagttggcc
aaaatcgcgcagaacgccaagtacgacctgctggtgttgcgccgtgccgggctggaagtg
gcggggttgagctgcgataccatgctggcttcctatctggccaacccggcggccaaatcc
cacggtctcgacaccctggcttcggagctgctcggctatcgcaccatcggttacaccgag
gtgacgggcaagggcaaaaaacagatcggcttcgaagaagtcgagatcgaaaaggccacg
gtttatgccaccgaagatgccgacatcaccctgcggctggccgataagctggaaccgcag
ctggcggaaacgggtcagggcgaattgtttcgaacagtggaactgccgctggtgacggta
ctgagcgatatggagtggcaaggcgtgcgcatcgatgccgactttctcaagggattgtcg
gcggatatgaagacgcgactggcgacgctggagggggaaattcacgaactttccggtcgg
tcgttcaacgtggcgtcccccaagcagctcggcgaggtgttgttcgagcacctgaagttg
ccgcgcggtaaaaagaccaagaccggctggtctaccgatgtcgaagtcctgaccaacctt
gctgaagaacatccgatcgccgccagggtgctcgattatcgctcggtggccaagctcaaa
agcacttattgcgatgcgctacccaagctgattcatcccgataccgggcggatccatacc
tctttcaatcaggcggtaacggcaaccggacgcctttcttcgagcgatccgaatctgcag
aatatacccatccgtacagaggaggggcgccgtattcgcgaagcctttgtgccggccgag
ggaaatctgctgctggcggcggactattcccaggtggaattacggattctggcacacatg
gctgacgagccggctctcaaggagagtttcgcgcatggcgaagacattcatgcgcgcacc
gcaagcgagatcttcggtgtgtttctggagcttgtcacgccggaaatgcgccgccaggcc
aaaaccatcaatttcggtgtgctttacggcatgagcgccttcggcctggccaaatccctc
ggcatcgcgcgcaaggaagcccagacctatatcgacaattattttgcccgttaccccaag
gtgctggaattcatggaggccaaaaaggccgaagcgcgggaaaagcaatatgtcacgacc
cttctcggaaggcgttgcgccgtaccggagatcgccagtaaaaacggcgcggtccgcggt
tatgccgaacgcaatgccatcaactatccgattcagggctcggcggccgacatcatcaag
gtggccatgctgcgcattcacgaacgcctgaaggccgaaaaactggagaccaagatggtg
cttcaggtgcatgacgaactggtgttcgatatgcctgccgcagaacaggccgccgtggaa
aacctggtgcgggagcagatggaacacgcctttgagctcgatgtgccgctgttggtcgat
atgggcgtcgggcgtaactggcgcgaggcgcactga
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