Syntrophotalea carbinolica: Pcar_0815
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Entry
Pcar_0815 CDS
T00285
Name
(GenBank) efflux pump, RND family, membrane fusion protein
KO
K02005
HlyD family secretion protein
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99992 Structural proteins
Pcar_0815
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Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
BSH_CzcB
Beta-barrel_RND_2
YknX_C
BSH_CusB
HH_MFP_RND
Beta-barrel_YknX
Beta-barrel_AprE
Biotin_lipoyl
BSH_YknX
CzcB_C
Beta-barrel_RND
BSH_YhbJ
DUF7224
Motif
Other DBs
NCBI-ProteinID:
ABA88072
UniProt:
Q3A6D5
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Position
962021..963325
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AA seq
434 aa
AA seq
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MNDISKNNSDSAETGFEALLTAHAGGGVLRRWRWALITAAIVLLLTGFFLFRGNGDSQGP
QYLTEKVTEGKLVVKVTATGNLEPTNQVEVGSELSGTVDAVYVDDDDRVTKGQLLAKLDL
SKFEDAVAHSRAAVEVAEAELQQALATFEETHAKLDRYREVSRLSGGKVPSKTEMEAAEA
DVARAKADQENARAGIAEAKANLRSDETDLAKAHIRSPIDGVVLERAVDPGQAVAASLQA
VTLFTLAEDLSKMELEVDVDEADVGQVKAGLGASFSVDAWPDRNFEAVITRVGFNASDDD
GVISYPAVLKVANDDLSLRPGMTATAVVTTLTHENALLVSNAALRFTPSEDTSAEKSGGS
LVSSLIPHPPARTHKAQASAVAEDGSQCVWVLRDGQAAPVQVKTGASNGRVTEILDGELQ
VGMDVITETVSMQP
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatatttccaaaaacaatagtgatagtgccgaaaccggttttgaagccctgcta
accgcccatgctggcggcggtgtcctgcgccgttggcgttgggccctgattacggcagcc
atcgtgttgttgctgacgggatttttcctgttcaggggcaacggagattctcaggggccg
cagtacctgaccgaaaaggtgaccgagggtaagctggtcgttaaggtgaccgctacgggg
aatctggaaccgaccaatcaggtggaggtcggcagtgagctttccggtacggtggatgcc
gtttatgtcgacgacgacgatcgcgtgaccaaggggcagctgttggccaaactcgacctg
tccaagttcgaagacgcggtggcccattcccgggccgctgtcgaagttgccgaggcggaa
ctgcaacaggctctggcgacgttcgaagagacccatgccaaacttgatcgataccgtgag
gtttcgcgcttgtccggtggcaaggtgccatccaaaaccgaaatggaagccgctgaggcg
gacgttgcccgcgccaaagccgaccaggagaatgcccgggccggcatcgccgaggccaaa
gccaatttgcgcagcgacgaaacggacctcgctaaggcgcatatccggtcgcccattgac
ggggtggtgctggagcgggcggtagatccgggacaggcggtggccgcttccctgcaagcc
gtgaccctgtttaccctggccgaggatctttccaagatggaactcgaagtcgatgtggac
gaagccgacgtcggtcaggtcaaagccggattaggtgccagtttcagcgtcgatgcgtgg
ccggacagaaacttcgaggccgtgatcacccgggtcgggttcaatgcttccgatgatgac
ggagtcatatcctatcctgccgtactgaaggttgcgaacgacgatctcagtttgcgtccg
ggcatgaccgccaccgctgtggttacaacccttacccacgaaaatgcgctgctggtatcc
aatgccgcgttgcgctttacgccatcggaggatacgtcggcagaaaaatcgggcggtagc
ctggtcagttctctgataccgcatccccccgcccgtacccataaggcccaagcttcggca
gtcgctgaagacggtagccagtgcgtatgggtattgcgtgacggacaggcggccccggtg
caggtcaaaacgggagccagcaatgggcgtgttaccgagatcctcgacggagaattgcag
gtcggcatggatgtcataaccgaaaccgtgagtatgcagccatga
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