Syntrophotalea carbinolica: Pcar_0852
Help
Entry
Pcar_0852 CDS
T00285
Symbol
cirA
Name
(GenBank) Fe(III) uptake ligand-gated TonB-dependent outer membrane channel
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_0852 (cirA)
Transporters [BR:
pca02000
]
Other transporters
Pores ion channels [TC:
1
]
Pcar_0852 (cirA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
SPACA7
Motif
Other DBs
NCBI-ProteinID:
ABA88108
UniProt:
Q3A699
LinkDB
All DBs
Position
complement(1005192..1007093)
Genome browser
AA seq
633 aa
AA seq
DB search
MKNVFIAMSVLCIMMCANRTLADQVNDDQEVFETEKMVVTATMTEKIMKDAPGAIEVISA
QEILEMNAQTVSEAIEEATGLLVTTETGRQKRPSIRGTGDKHTLVLIDGRRVVAGFKDLL
SINQLPVDLIDHIEVVRGPASALYGSDAIGGVVNIITRRPTRRLALGATAQYGQNGYHEG
EKTRGRAYVGKATERFGVFLAGGYQKQNAFDRDGVTPDDSDTIKLKSVGGRFTFSLAEGH
ELLAGFEAMDRELSGLRDLMNMDRLRTVEEERLNGFLQYDAKITSLSRLMLRFNHSEQEN
EVDTDPAIPEVSGAIGNESDAKRWLDQIEGRYSGLFYDRHLITVGTEYRVEGRKDDAGLD
DDIHNLSFYGQDEYRVFDPLYLVVGCRWDEHSEFGSEWTPRVSATYHILDNLRLKASYGR
GFRAPGFMELYVPTYMKQGKQICEPNADLDAETSDSYEVGIEGEYGRFQGRFMWFYTEID
DLIDAVWYMSTGSGKKKKDYYQYQNIAEATMEGVEFEGRLKLPYGFALTGNITYLDTEDK
DTGKDLEGRPDYKGTLKLSYRQPLSGWAANIRFNYIGERYYSGGDEDDVFLVNTYLAKNI
TRQWKVFAGVDNIFNTGTTREPMFWYSGVSYDY
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgaagaatgtttttattgcgatgagtgtgctttgcatcatgatgtgcgccaaccgaacc
ttggccgaccaggtcaatgacgaccaggaggtctttgaaaccgaaaaaatggtggtcacc
gctaccatgacggaaaagatcatgaaagatgcaccgggagccatcgaggtcatcagcgca
caggaaatccttgaaatgaatgcgcaaaccgtgtccgaggcgatcgaggaagctaccggc
ctgctggtaacgacggagacgggacgacagaaaagaccgagtatccgcggcacgggcgac
aaacacaccctggtgctgatcgacggacgccgggtcgtggccggcttcaaggatctgctc
agcatcaatcaactccccgtggatctgatcgatcacatcgaagtggtacgcggccccgca
tcggctttgtacggcagcgacgccatcggcggggtggtcaacatcatcacccgacggccc
accagacgattggccctgggcgccaccgcgcaatacgggcagaacggttatcacgaaggg
gaaaaaaccaggggccgggcttatgtcggcaaggccacggaacgtttcggcgtctttctg
gccggcggctaccagaaacaaaacgcctttgaccgcgacggcgtcacgcccgacgacagc
gacacgatcaagctcaaatcggtcggcggacgcttcaccttcagcctcgctgaagggcac
gagctgctggcgggtttcgaagccatggaccgggaactgtccggcctcagggatcttatg
aatatggaccggttgcgaaccgtcgaggaggagcgcttaaacggctttcttcagtacgac
gccaaaatcacgtccctctccagactgatgctgcggttcaatcattccgaacaggaaaac
gaagtcgatacggatccagccatcccggaggtaagcggcgccatcggcaacgaatcggat
gcgaaacgctggctggaccagatcgagggacgatacagcggcctgttctacgatcgtcac
ctgattaccgtgggcaccgaataccgggtcgagggacgcaaggatgatgccggtctggac
gacgatatccataacctcagcttctacggtcaggacgaataccgggttttcgatcccctc
tacctggtggtcggctgccgctgggacgagcattccgagttcggctccgaatggacgccc
cgagtctccgccacctaccacatcctggacaacctcagactcaaagcatcctacggcagg
ggcttccgcgcccccgggtttatggagttgtacgtccccacctacatgaaacagggcaag
cagatctgcgaacccaacgctgatctcgacgccgagacctccgacagctacgaagtcggc
atcgaaggcgagtacggacgctttcagggccgcttcatgtggttctatacggaaatcgac
gatcttatcgatgcggtctggtacatgtccaccggctcgggcaagaaaaaaaaggactat
taccagtaccagaacatcgccgaagcgaccatggaaggggtcgaattcgagggacgtctg
aaactgccttacggcttcgccctgacgggcaacataacctacctggatacggaagacaaa
gatacgggcaaggatctggagggtcgccccgactataagggaaccctgaaactgagctac
cgccagccgctttcgggatgggctgcgaatatccgcttcaactatatcggcgagcgctac
tactccggcggagacgaggatgacgtcttcctggtgaacacctacctggcaaaaaacatc
acccggcaatggaaagtcttcgccggcgtggacaatatcttcaataccggcacaacccgg
gaaccgatgttctggtacagcggggtttcctacgattactga
DBGET
integrated database retrieval system
