Syntrophotalea carbinolica: Pcar_0902
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Entry
Pcar_0902 CDS
T00285
Symbol
acoR-2
Name
(GenBank) sigma-54-dependent transcriptional regulator, AcoR family
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pca03000
]
Pcar_0902 (acoR-2)
Transcription factors [BR:
pca03000
]
Prokaryotic type
Helix-turn-helix
Other families
Pcar_0902 (acoR-2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
GAF
AAA
AAA_2
HTH_50
SdpA
DUF815
Mg_chelatase
AAA_7
HTH_7
nSTAND3
TsaE
MCM
AAA_3
Motif
Other DBs
NCBI-ProteinID:
ABA88156
UniProt:
Q3A651
LinkDB
All DBs
Position
complement(1064458..1066476)
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AA seq
672 aa
AA seq
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MALLNQKQHIEKVYSAVAHTNGAVTASVDAPVLCSWQRSMNQHGIDPADAARVRILTERE
FKEQAEAVDDFLRIARPAVRELFRQVSPHGYCALLCDHNVTTLDWLGDDQQAREWKKAGL
YLCSIWAEEEEGTCAVGTCLVEKRAITIHKGEHFRVVNADLTCSAAPILDPFGEMLGLID
ISALRSPDSKESQYFALQLVKQTAQLIEAAYFYHQFEDQWLLCICNNREMAAVNKTCLLA
LDGNGTVLAADQTARQQFGGGIYKTMIGRDIGDIFDIKFDQFIDVAGKSNMTWPIRTITN
GDYYFATLRSPQAIGIKSIQNRPAPKAKATPLKELSVAEPLSLDLLAGADRRLREIVTRA
KRVLDKNIPILLNGETGTGKEVFARAIHNASSRANKPFVAINCASIPESLIESELFGYTA
GAFTGALNKGMQGKIVQSNGGTLFLDEIGDMPTSLQPRLLRVLAEKEITPLGGASPIPVR
LNVICATHRNIRDMVAEGSFREDLFYRLKGISFVLPPLRQRTDLAQLIRLALAIEANTEI
GAIAIDEEALNLLTRYDWPGNIRQLRNVLRYALAMSDGDGIISTSLPEEVTDPELTALLP
PMETSAPEKMQSAAQEEHSWSPMEQAEIALILDALKKHQWQVIKAAKEIGIGRSTMYRKM
EKYDIVPPNKRP
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggctctcttaaatcaaaagcaacatatcgagaaagtctactcagcggtcgcccacacc
aacggcgccgtgacagcctctgttgacgcaccggtactctgttcctggcagcgcagcatg
aatcagcacgggatcgatcccgccgatgcggctcgggtcagaatacttaccgaacgcgag
tttaaggaacaagcggaggcggtcgacgactttttacgtatcgcacggcccgcagtcaga
gaactcttccgccaggtctcgcctcacggctactgcgccctgttgtgcgaccataacgtc
acgacccttgattggctcggtgacgatcaacaggcccgggaatggaaaaaagccggcctc
tacctttgctcgatctgggccgaagaggaagaaggcacctgtgccgtcggtacctgcctg
gtcgaaaagcgagccatcaccatccacaagggcgagcacttccgggttgtcaacgccgat
ctgacatgctctgcggcaccgatactcgatccttttggcgagatgctgggcttgattgat
atttcggccctgcgttcgcccgactccaaggagagccagtattttgccctgcaactggtc
aaacagacagcccagctcatcgaggcggcgtatttttatcatcaatttgaagatcagtgg
ctgttatgtatctgcaacaatcgggaaatggctgcggtaaacaagacctgcctattggct
ctggacggcaacggaaccgtgcttgctgccgatcagacggcacggcaacaatttggcggc
ggcatttataaaactatgatcggacgcgatatcggtgatattttcgatatcaaattcgac
caatttatcgacgttgcgggcaaatcgaacatgacatggcccatccggaccattaccaat
ggtgactattacttcgccacgttgcgttcacctcaagctatcggcatcaaatcgatccag
aatcgtcccgccccaaaagccaaggccacaccacttaaagaactttccgtcgccgagcct
ctgagccttgacctcctggccggtgccgaccgccgattgagagaaatcgttacccgtgcc
aagcgggtcctggacaaaaacatccccatattgcttaacggtgaaaccggtacgggcaag
gaggtgttcgcgcgcgcgattcacaatgccagcagccgggccaataaaccgtttgtggcg
atcaactgcgcatcgattcccgaatcgctcatcgaaagcgaactgttcggttacaccgca
ggcgccttcaccggagcgctcaacaaaggcatgcagggcaagatcgtgcaatcgaacggc
ggcaccttgtttctcgacgagatcggcgatatgccgaccagcttgcagccccgcttgctg
cgggtgcttgcagaaaaagaaatcactcccctgggaggcgccagtcccatcccggtacgc
ttgaatgtgatctgcgccacccaccgcaacatccgggacatggtggccgaaggcagtttc
cgggaagacctcttctaccgacttaaaggcatatcctttgtcttgccgccgctgcgtcag
cgaaccgacctcgctcagcttattcggctggctctggccatcgaggcaaatacggagatc
ggtgcgatcgccatagacgaggaagcgctgaatctgctgacccgctatgactggccggga
aatatccgccagttgcgcaacgttttacgttatgccctggccatgtccgacggtgacggc
atcatctcgaccagtttgccggaagaggttacggatccggagctgacggctctgctaccg
cctatggaaacctccgcacctgaaaaaatgcagtctgcggcacaagaagaacattcgtgg
agccccatggaacaggcggaaatagcactcattctggatgccttgaaaaaacaccaatgg
caagttataaaagcggcgaaggaaatcggcatcggtcgatcgaccatgtatcgtaaaatg
gaaaagtacgatattgtcccgcccaacaaacgcccataa
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