Syntrophotalea carbinolica: Pcar_1046
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Entry
Pcar_1046 CDS
T00285
Symbol
mrdA
Name
(GenBank) peptidoglycan transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00550
Peptidoglycan biosynthesis
pca01100
Metabolic pathways
pca01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Pcar_1046 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Pcar_1046 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pca01011
]
Pcar_1046 (mrdA)
Enzymes [BR:
pca01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Pcar_1046 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
pca01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
Pcar_1046 (mrdA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Stimulus_sens_1
SHOCT_2
Motif
Other DBs
NCBI-ProteinID:
ABA88296
UniProt:
Q3A5R1
LinkDB
All DBs
Position
complement(1227265..1229124)
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AA seq
619 aa
AA seq
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MNLEFESDWQTLPHSRKRYVLASLIAAIIFLLLLLRLWQLQIISNDHYRTLSEKNRTRYI
PITAQRGRIFDRDGKLLADNRPAFDVAVLRQEVDDPSLLLERLAGFLSIDREELRKRWNA
GKRLPRYRPITLAWDVDRDTLEKIMENTVDLPGVLMETRPVRSFPLGAVAPHFLGYLGEI
AEKDLKLPEFEEYSPGDVVGKAGIEKKLEHVLCGINGERRVEVDVQGKSMRILKTQDPQP
GNQVVLTLQASLQQVAEKAFDGQAGAAVVLDVHTGEILAITSQPTFDPAQFARGLTTREW
RALQNNPLKPLQNRAISGQYPPGSIFKIVTALAALKAGAARPDTRVNCEGSTTVGNHTFR
CWKRRGHGVTDLRKALKESCDVWFYEVALNVGIDRIAAMARELGLGSALGFQVGMEKGGL
IPDRAWKKARYGTSWYLGETLNASIGQGYILTTPLQLATMTAAVANGGTVFRPHIVKSIE
NLTSGIVQQTEPEILHRADLSAQHLNAVRKGLEAVVNEPGGTAWKSRLEELPYAGKTGTA
QVVKLRDDIKDEKLIPYRFRDHALFAAYAPARNPEIAVAVVVEHGSHGSSAAAPIAKTII
AHYFGLDKQPSSDKTLSSE
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
ttgaacctagaatttgaaagcgactggcagaccctgccgcatagccgcaaacgttatgta
ctggcgtccctgatcgccgctattatctttttactgctgttgttgcgcctctggcagttg
cagatcatcagcaatgatcactatcgtactctgtcggagaaaaaccgtacgcgctacatc
cccataactgcccagcggggacgcattttcgatcgcgacggcaaactgctggcggataat
cggccagccttcgatgtggcggtgttgcgccaggaggtagacgatccctctttattgctg
gaacggctggccggctttttatccatcgaccgggaagaattgcgcaaacgctggaatgcc
ggcaagcgcctgccccgttaccgcccgatcaccctggcctgggatgtcgaccgcgacacc
ctggaaaagatcatggaaaacaccgtcgatctgcccggagtgttgatggaaacccgcccg
gtacgctcctttccgctgggggccgtggctcctcacttcctcggctaccttggcgaaatt
gccgaaaaggatctgaaactgccggaattcgaggaatacagtccgggcgatgtggtgggc
aaagccggtatcgaaaaaaagctggaacatgtgttgtgcggcatcaatggcgaacgacgg
gttgaagtcgatgtccagggcaaatccatgcggattctcaaaacccaggatccgcaaccg
ggcaaccaggtcgtcttgaccctgcaggcctccctgcagcaagtcgcggaaaaagccttt
gacggtcaggccggggccgccgtggtgctcgatgttcacaccggggaaatcctcgccatt
accagtcaaccgaccttcgacccggcacaattcgcccgcggtctgaccaccagggaatgg
cgcgccttgcagaacaaccccttgaaaccgctgcaaaaccgcgccatcagcggacaatat
cccccggggtccatttttaaaatcgtcaccgccctggccgccctcaaagccggggccgcc
aggcctgacacccgtgtaaactgcgaaggctccaccaccgtcggcaatcacacctttcgc
tgctggaagcgtcgcggacacggtgtgaccgacctgcgcaaagcgcttaaagaaagctgc
gatgtctggttctatgaagtagccctcaacgtcggcatcgaccgaatcgccgccatggcg
cgggaactcggcctgggcagcgcccttgggttccaggtgggcatggaaaaaggcggtctg
atacccgaccgggcctggaaaaaggctcgctacggcaccagctggtatctcggcgagacc
ctgaacgcctccatcgggcaggggtatatcctgaccacgccgctgcaactggccaccatg
accgctgccgtcgccaatggcggcacggtgtttcgtccgcatatcgtgaaaagcattgaa
aacctcacaagcgggatcgtacaacaaaccgagcccgaaattctccaccgggccgactta
tccgcccagcatctgaatgcggtacgcaagggattagaagccgtggtcaacgaaccgggg
ggcacagcctggaagagtcgacttgaggagttgccctatgcgggaaaaacggggaccgcc
caggtcgtgaaactgcgcgacgacatcaaggacgaaaagctgattccctaccggtttcgc
gaccatgccctgttcgccgcctatgcaccggcccgcaatcccgagatcgcggttgccgtg
gtggtggaacatggcagccatggcagcagtgctgcggctcccatagccaaaaccattatc
gcccactatttcgggttggacaaacaaccttcctcggataaaaccctgtccagcgagtga
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