Syntrophotalea carbinolica: Pcar_1077
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Entry
Pcar_1077 CDS
T00285
Name
(GenBank) sensor diguanylate cyclase, HAMP domain-containing
KO
K03406
methyl-accepting chemotaxis protein
Organism
pca
Syntrophotalea carbinolica
Pathway
pca02020
Two-component system
pca02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pcar_1077
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Pcar_1077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pca02035
]
Pcar_1077
Bacterial motility proteins [BR:
pca02035
]
Flagellar system
Chemotaxis proteins
MCPs
Pcar_1077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cache_3-Cache_2
GGDEF
sCache_3_3
PAS_3
HAMP
sCache_2
dCache_2
PAS_9
PAS
TMF_TATA_bd
dCache_1
Motif
Other DBs
NCBI-ProteinID:
ABA88327
UniProt:
Q3A5N0
LinkDB
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Position
1266071..1268497
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AA seq
808 aa
AA seq
DB search
MKIRTKIIGMGLMLVLITAFTIVGISIDQVHVLDTAIDEEMESFIHNETRKVAESVYLMC
RSVQQLQDESLKRNLDVATKLLDKQGGLSFSPERVRWSAENQFDKSVKAIELPKVLVGAR
WLGQNADITRESPIVDQVQKTLGVTCTLFQRMNESGDMLRVATNVLNDDGTRAIGTYIPQ
RNPDGSLNPVIGALMSGKPYVGSSFVVNDWYVTRYEPIMDNTGKHLVGALYVGYRQESLE
SLRSGILDLVVGKTGYVYILGSKGSQRGKMLISPLTRYDGKSAILNEDRQIQIVAHRLLQ
KASQLSRRPHSNDEIPVIFEQYPWRHRAEEPYRAKLVAVTYFEPWDWVIVAGAYRDDYAD
IQNRFVDSLSRTVLSISAAALGIVLLSLVIGFYVSRGIVRPLERAIALFERIGKGRLDRH
LNMTQGDEIGQLARAFDRMIDNLKDVTASRNELNREIIERTRAESELRATSAQRQELESI
VNQSPAVAFLWRLRDKWAAEFVSDNIRQFGYEPTDFTSGKVDFLSIVHPDDVEKALSAAI
SAIKRGRDEQLSLEFRLIKYNGDIAWVDVRLWLGRDQGDAVTHFQGVMLDVSDRKKAQEQ
VRQLAFYDALTGLPNRTLLANRLDQSLAQAQRDGRMLALLYLDLDRFKEINDTYGHAAGD
MVLQAAAQRLNSCIRRNDTVARLGGDEFVVLLPGLENVDQPTTVAEKILKVMKVPFQVES
QQLNVTPSIGMVLYPEHGQELGVLLKRADIAMYAAKSRGRNGYACFSEEMEKDSQVVGTS
LRAHPLKPLECIARPELAASRKPQKKDR
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaagattcgtaccaagattatcggtatggggttgatgctggtattgattacggcattc
accatcgtcgggatatctatcgatcaggtccatgtcctcgataccgctatcgatgaggaa
atggagagctttattcataatgaaacgcgcaaggtggcggagagcgtctatctcatgtgc
cggtccgtccagcagcttcaggacgagtccttaaaacgcaatctcgatgttgccaccaag
ctgcttgataagcagggcgggctgtctttcagtcctgaacgggttcggtggagtgccgaa
aatcagttcgataaaagcgtcaaagccatagaactgcccaaggtgctggtcggcgcccgc
tggcttggtcagaatgccgacatcacccgcgaatctccgattgtcgatcaggtgcagaaa
acgttgggggtgacttgcacgctgtttcagcggatgaacgagtccggcgatatgctgcgc
gtggccaccaatgttcttaacgatgacggcacacgggctatcggcacctatatcccccaa
cgtaatccggacggcagtctgaatccggttatcggcgcgctgatgagcgggaagccttat
gtgggcagttcctttgtcgtgaacgattggtatgttacccgttacgaaccgatcatggac
aacacgggcaaacaccttgtcggtgccctgtatgtcgggtatcggcaagagagtctggag
agcctgcgaagcgggattctcgatctcgtggtcggaaaaaccggttatgtgtatattctc
ggcagcaaaggcagtcagcggggtaaaatgcttatttcgcccctgacccgttacgatggc
aagtcggccatcttaaacgaggaccggcagatacagattgtcgcgcaccgtctgctgcag
aaggcctcgcagctttcccgcaggccgcacagcaacgatgagatccccgttattttcgaa
caatatccgtggcgacatagagcggaggagccctatcgcgcaaaactggttgccgtgacc
tatttcgagccatgggattgggttattgtggccggggcctatcgggacgattacgccgat
atacagaaccgtttcgtcgattcgctatcgcggacagtcttatcgatctcggccgctgcg
ttgggcatagtgctgctttccctggtgatcggtttttatgtctccaggggtattgtgcgt
cctctggaaagggctatcgcactgttcgagcgtatcggaaaaggtcgtctcgaccggcat
ttgaatatgactcagggcgatgaaatcgggcagttggcccgggctttcgaccgcatgatc
gataatctcaaggacgtgacggcctcgcgtaacgaactcaatcgggagattatcgaacgc
acccgcgctgaatcggagctgcgagccacatccgcgcaacgccaggaattggagtcgatt
gtcaatcagagtccggcggtggcctttttgtggcggctgagagataagtgggcggcggag
tttgtgtccgacaatattcggcagttcggttacgagcccacggattttacttccggcaag
gtcgattttttgtccattgtgcacccggacgacgtggaaaaagcattatctgcagcgatc
tcggcaataaagcggggacgtgacgaacagttatcactggagtttcgcctgatcaaatac
aacggcgatattgcctgggtcgatgtgcggctttggcttggccgcgaccaaggcgatgcg
gttacccattttcagggcgtcatgctcgatgtcagcgatcgcaaaaaggcgcaggaacag
gttcgccagttggctttttacgatgctctgaccggtctgccgaatcgtacattgctggcc
aatcgactcgaccaaagtcttgctcaggcgcagcgcgatggcaggatgctggccctgctg
tacctggatctcgatcgcttcaaggagataaacgatacctatgggcacgctgcgggagat
atggtgttgcaggctgcggcccaacgcctgaactcctgtatccgccgcaacgataccgtg
gcgcgtcttggcggcgacgaattcgtggtgcttttgccgggcctggagaacgtcgaccag
cccacgaccgtggcggagaagatcctcaaggttatgaaggtgccgtttcaggtcgagtcc
cagcagcttaatgtgacgcccagcataggcatggtgctttatccggagcatggtcaggag
ttgggcgtattgctgaagagggcggatatcgccatgtatgccgccaagagccggggccgt
aacggttacgcctgtttttccgaggagatggagaaggacagccaggtagttgggaccagt
cttcgggctcaccccttaaagcccctggagtgcatcgcgcggcccgaacttgctgcgtca
cgaaaaccgcagaaaaaagaccgctga
DBGET
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