Syntrophotalea carbinolica: Pcar_1083
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Entry
Pcar_1083 CDS
T00285
Name
(GenBank) helix-turn-helix transcriptional regulator, AraC family
Organism
pca
Syntrophotalea carbinolica
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Gene cluster
GFIT
Motif
Pfam:
AraC_N
HTH_18
HTH_AraC
AraC_binding
Motif
Other DBs
NCBI-ProteinID:
ABA88332
UniProt:
Q3A5M5
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Position
1271635..1272579
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AA seq
314 aa
AA seq
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MKKQNVDGSVVALTKSEPLTALVADIARWTTGCGEFQTPVPGLTFYHHDQPTEPKPGLTE
PSICLIAQGAKRIHLEDETFDYDAHRYLLASVYLPTTYQVISASPGEPYLGLVLKFDMRE
LSRLMIDSNLPATRTRDIDRCMSTGEVTLPLLSAFQRLVALVNEPEDIPILAPMLHREIL
YRLLVGDQGDRLRQIAASGSRSHQVARAIEWLKTNFAQQLRIDELAGMANMSASSFHSHF
RAMTSLSPLQYQKHLRLQEARRLMLAEDLDATRAAFQVGYESSSQFSREYSRLFGAPPLR
DVNSLRQAAVGDDG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacagaatgttgatggatcggtggttgcgttaaccaagagcgagccgctcaca
gcgttggtggcggatattgcccgatggaccacaggttgtggtgagttccaaacgccggtg
ccgggtttgaccttctatcaccacgatcaaccgaccgaaccgaaacccggtctgaccgaa
cccagtatctgcctgattgcgcaaggagccaaaaggatccatctcgaggacgagacattc
gactacgatgcccacagatacctgcttgcatcggtctatctgccgacaacttatcaggtc
atttcggccagtcccggggaaccgtacctggggctggtgctgaaattcgatatgcgcgag
ctgtctcgcctgatgatcgacagcaatctgcccgcaacgcgcaccagggacatcgaccga
tgcatgtcgaccggcgaggtcactctgcccctgctcagcgcttttcaaaggcttgttgcc
ctggtaaacgaaccggaggatatcccgatactcgcgccgatgttgcaccgggaaatcctc
tatcgcctactggtgggcgatcaaggcgacaggctgcgccagatcgccgcaagcggcagc
cgcagccaccaggtggcgcgggccatcgaatggctgaaaacaaactttgctcagcaattg
agaatcgacgaactggccggaatggccaatatgagcgcatcgagcttccacagtcacttt
cgcgccatgacctccctgagtccgttgcaataccagaagcacctgcgcctgcaggaggca
cggcgactgatgctggccgaagacctggatgcgaccagggcggcttttcaggtcggatat
gaaagttcgtcgcagttcagccgcgagtacagccggttattcggggcgccaccgttgcgg
gatgtgaatagcttgcggcaggcagcggttggtgatgacgggtga
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