Syntrophotalea carbinolica: Pcar_1248
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Entry
Pcar_1248 CDS
T00285
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
Pcar_1248 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pca01007
]
Pcar_1248 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pca03016
]
Pcar_1248 (lysS)
Enzymes [BR:
pca01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
Pcar_1248 (lysS)
Amino acid related enzymes [BR:
pca01007
]
Aminoacyl-tRNA synthetase
Class II (A)
Pcar_1248 (lysS)
Transfer RNA biogenesis [BR:
pca03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
Pcar_1248 (lysS)
Prokaryotic type
Other AARSs
Pcar_1248 (lysS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ABA88497
UniProt:
Q3A560
LinkDB
All DBs
Position
1466968..1468452
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AA seq
494 aa
AA seq
DB search
MEELNDLLLQRRAKLDEFRGEGVNPYANDFCVTATSGDIVAAHGEQDGAALENINHHYAL
AGRMMARRDFGKAAFIQIQDRHGRLQVFVRRDNVGEEAFQMFRKLDIGDIVGVTGKPFRT
KTNELSLRADSLRLLTKSLQPLPEKWHGLTDVEMRYRQRYLDLIVNPDVQEIFKKRSQIV
SLIRNFMVDNDFLEVETPMMQPVAGGATARPFMTHHNTLKMDLFLRIAPELYLKRLVVGG
FERVFEINRNFRNEGISIQHNPEFTMMEFYQAYANYEDLMDFTEKLICHVAEKVVGSLTF
TYGGREVDLTAPWDRLTVKEAILKYGDVEPEVLEDKDQCLAYARSLGLDFDDTIGYGKLL
TELFDEVAEPKLWNPTFITQYPTEVSPLSRKNEDNPEVVDRFELFVVGRELANAFSELND
PIDQKDRFAKQLLEKEAGDDEAHAMDEDYIRALEYGLPPTAGEGIGIDRLVMLLTDAASI
REVILFPQLRPEAK
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atggaagaattaaacgatctgttgctgcagcgtcgcgccaaattggacgagtttcggggc
gagggggtcaatccctacgccaacgatttttgcgtgactgctacctccggggatattgtc
gcagcccatggtgagcaggacggcgcagcgctggaaaatatcaatcaccactatgctctt
gccggtcgcatgatggctcgtcgtgatttcggcaaggccgcttttatacagattcaggac
cgccatggtcgtctgcaggtattcgttcgtcgtgacaatgtcggggaagaagctttccag
atgttccgcaagctcgatatcggggatattgtcggggtgacaggcaagccgtttcgtacc
aagaccaacgaactgtctttgcgtgcggactcccttcgtctgctgaccaagtccttgcag
ccgctgccggaaaaatggcatggcctgaccgatgtggaaatgcgctatcgtcagcgctat
ctcgatctgatcgtaaatccggatgtccaggagatattcaaaaaacgtagtcagatcgtc
agtcttatacgtaatttcatggtggataacgactttctcgaagtcgagacacccatgatg
cagcctgtggcgggcggcgccacggcgcgaccgtttatgacccatcataatacgctgaag
atggatctgtttctgcgtattgcccccgaattgtacctcaagcgtctggtggtgggcgga
tttgaacgggtgttcgagatcaatcgcaacttccgaaacgaagggatttccattcagcat
aatcccgaattcaccatgatggagttttatcaggcctacgctaactacgaagacctgatg
gactttaccgaaaagctcatctgccatgtggcggaaaaggtggtcggttctctcaccttt
acttacggcggccgggaggtggatctgacggctccgtgggatcgtttgaccgtcaaggaa
gcgattctcaagtatggcgatgtcgaaccggaagtgctggaggacaaggatcagtgtctg
gcctacgcccgaagcctcggtctggattttgacgatacgatcggttacggcaagctgttg
accgaactttttgacgaggtggcggagccgaaattgtggaatccgacctttatcacccaa
tatccgaccgaagtatccccgctttcgcgcaaaaacgaggacaatcccgaggtggtcgat
cgctttgagttgtttgtcgtcggtcgcgaattggccaacgccttttccgagctcaacgat
ccgattgatcagaaagatcgctttgccaagcagctgttggagaaggaagccggcgacgat
gaagcgcatgccatggacgaagactacatccgtgccctggagtacggattgcctcccacc
gcaggtgaaggcatcggtatcgatcggctggtcatgctgctgaccgatgcagcgtcgatc
cgggaggtcatcctgtttcctcaattgcgtcctgaagccaaataa
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