Syntrophotalea carbinolica: Pcar_1260
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Entry
Pcar_1260 CDS
T00285
Symbol
kdtA
Name
(GenBank) CMP-3-deoxy-D-manno-octulosonate--lipid A tetraacyldisaccharide 3-deoxy-D-manno-octulosonate transferase
KO
K02527
3-deoxy-D-manno-octulosonic-acid transferase [EC:
2.4.99.12
2.4.99.13
2.4.99.14
2.4.99.15
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00540
Lipopolysaccharide biosynthesis
pca01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Pcar_1260 (kdtA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pca01005
]
Pcar_1260 (kdtA)
Enzymes [BR:
pca01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.12 lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Pcar_1260 (kdtA)
2.4.99.13 (Kdo)-lipid IVA 3-deoxy-D-manno-octulosonic acid transferase
Pcar_1260 (kdtA)
2.4.99.14 (Kdo)2-lipid IVA (2-8) 3-deoxy-D-manno-octulosonic acid transferase
Pcar_1260 (kdtA)
2.4.99.15 (Kdo)3-lipid IVA (2-4) 3-deoxy-D-manno-octulosonic acid transferase
Pcar_1260 (kdtA)
Lipopolysaccharide biosynthesis proteins [BR:
pca01005
]
Lipid A
Pcar_1260 (kdtA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_N
Glyco_trans_4_4
Glyco_transf_4
Glycos_transf_1
Glyco_trans_1_4
Epimerase_2
Glyco_trans_1_2
Motif
Other DBs
NCBI-ProteinID:
ABA88509
UniProt:
Q3A548
LinkDB
All DBs
Position
1480879..1482174
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AA seq
431 aa
AA seq
DB search
MYLLYDLIWLVAATVLIPWYLLRRFCGGKNRKGLRERFGWYAPHRLAPLQGRPVLWLHAV
SVGETRAAVSLIRALKQTYPEHALVLTNVTETGHAIACDIDEVDLSLFFPFDISWAVRRV
LRQIRPDIVVIVETEIWPNLVRCAKRASIPMVLVNGRISDRSFPRYLKVRFLLRAILNRF
DALCMQTRQDQQRMLALGASEGHVAVTGNLKFDMSCDGVGALTPEALRLAYKLSTETLVW
VAGSTHPGEEEKILHAFHEVRRQGVALTLVLAPRHPGRAQEVGELLDSHGLTWVVRTSLD
KYGDVLKDGAVLLVDTVGELLKLYAAADVVFVGGSLAPVGGHNVLEAALLKKPVLFGPHM
QNFREIARLLTEAGGGKMVAEQELVDELVRLLTDPEARKTMGAIGYDLLLQHTGATERTV
QVIRRVLSAEV
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
gtgtacctgctttacgatctgatctggcttgtcgcagccacggttctaatcccatggtat
ctgttgcgcagattctgtggaggcaaaaaccggaaaggtcttcgcgaacgcttcggttgg
tatgcccctcatcgtctggcccccttacaggggcgtccggtgctttggctgcatgccgtt
tccgtaggggagacccgcgccgcggtgtctttgattcgtgcccttaaacagacctatccc
gaacatgccctggtccttaccaacgttacggaaaccggccatgccattgcctgcgatatc
gacgaagtcgatctgagcctgtttttccctttcgatatatcatgggcggtgcggcgtgtc
ttgcggcagatcagacctgatattgtcgtcatcgtcgaaacggaaatctggcccaatctg
gtgcggtgcgccaagcgggcctcgatccccatggtactcgtcaacgggcggatttcggat
cggtcctttccccgttatctcaaagtacggtttttgctgcgggccattctgaatcggttc
gatgcgttgtgtatgcagacccggcaggatcagcaacgtatgctggcactcggtgccagc
gaggggcatgtcgccgttacgggcaatcttaagttcgacatgtcctgtgacggggtcggg
gcattgacgcccgaagcattacggcttgcctacaaattatccacggaaacactggtgtgg
gtggcaggaagtacccatcccggcgaagaagagaaaatcctgcatgccttccatgaagtt
cgaagacagggcgttgccttgacgctggttttggccccgcggcatcccggcagggcccag
gaggtcggagagttgctcgacagccatgggctgacctgggtcgtgcgtacttcgctggat
aagtatggcgatgtcctgaaggatggggctgtcctgctggtcgataccgttggcgagttg
ttgaaactctatgcggctgcggatgtcgtatttgtcgggggtagtctggccccggtgggc
gggcataatgtcctggaagcggcgttgttgaaaaaaccggtgttgttcggaccgcacatg
cagaatttccgtgaaatcgcgcggttgttgaccgaggccggtggcggcaaaatggtcgcg
gaacaggagctggttgatgaactggtgcggttgttgaccgatcctgaagccagaaagacg
atgggcgcgatcggatacgatctattgctgcagcataccggcgccacggaacgcacggtg
caggttatccggcgtgttttgagcgctgaagtatga
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