Syntrophotalea carbinolica: Pcar_1375
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Entry
Pcar_1375 CDS
T00285
Symbol
sbcC-2
Name
(GenBank) DNA repair exonuclease SbcCD, C subunit, putative
Organism
pca
Syntrophotalea carbinolica
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_21
AAA_15
AAA_27
AAA_29
SbcC_Walker_B
ABC_tran
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABA88622
UniProt:
Q3A4T5
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Position
1611986..1614430
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AA seq
814 aa
AA seq
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MLLIETIHLKNIKSHRDTTLSFSAGINVLSGPNGVGKSTVFEAIGYALFGVDARDFVSNI
ERFLSIGAKRGEVSVTFRVDAGDTWRVTRTVGGGVKWLLAREIASEFEVEEHANIRETEA
RLAELLGLANGRPLSEQFKLVIGPFQNDFLGPFVIKQATKRQEAFDETLGIDAWRKTYKG
TSGLLSAVQHNIGLLVAEVEGKQEQVAVLPEREQALADLKTEISAQRRLLEETTKQLETT
GRRLAECEMQEEALRMATTAVQELDIRIQNGKDKVATQRETVDQARAAVATLEKCRAGKE
SFEKADAALKSLREKERASRSLERHIAQLEKDSLAIGQRLEHENNEVQKAGQELDAEQQR
LAAARKELQPDAALVETAAGLKTLRQEAEALRTRRGLLTGRRVALAEGQEKLAEGVCPFF
AEPCRNIEGQQPRDVFSHKMTQLDAQVAELDARIEKNVQDSATAEKARQALDALKVRSAE
LDKQQTQLESRRQANAGRADGLAALQERQAKAVESLEERRKERKAFDGLEEALLRTEQER
ATYQTARDSFYAHAKDAGELDARQKTLTRWQHALDGLVEDRKAKLAERDRCQKAYDPSQH
QRTRQQKEQRVGEIAGLQQRIKGLEKDDERLTADITRLKQLQKLIAERLEQKKHYEEQEQ
LVKYLRNRVFRNVSNRLSERFREEISQRADRIYRTIAEGDEELLWGDNYQVVLRDMADGQ
LRERTDDQLSGGQMMSAVVALRLALLQTIGARVAFFDEPTSNLDAARRENLAHAFRAIDV
GREEVTEHWYDQLFLVSHDVAFTEITDQMIPLGE
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgttactgatcgaaacgattcatctgaaaaatatcaagtctcatcgggatacgaccctg
tccttttccgccgggatcaatgttttgtccggtcccaacggggtaggcaagagtaccgtg
ttcgaggccatcggctatgctttgttcggggtcgatgcacgggatttcgtctccaatatc
gagcggtttttatccatcggcgccaagcgcggcgaagtttcggtgaccttccgcgtggat
gccggcgatacctggcgggtgacgcgcaccgtcggtgggggcgtcaagtggcttctggcc
cgagagatcgccagcgaattcgaggtggaggagcacgccaatatccgggagaccgaagcg
cgcctggccgaacttttaggcctggccaacgggcggccgttgtctgagcaattcaagttg
gtcatcgggccgtttcaaaacgattttctcgggcctttcgtcatcaaacaagcgaccaaa
cggcaggaggcgttcgacgaaaccctcggcatcgatgcctggcgcaaaacctacaagggc
accagtggcctgctgtcggcggtgcagcataatatcggacttctggtcgccgaagtggaa
ggcaagcaggagcaggtcgccgtgttgccggagagggaacaagcgcttgccgatttgaaa
acggaaatttcggcacagcgacgcctgctggaggaaacaaccaaacaactggagaccaca
gggcgccgacttgccgaatgcgagatgcaggaggaggccctgcgcatggcgaccaccgcg
gtgcaggagctcgacatccgcatccagaacggcaaagataaagtagccacccagcgggaa
acggttgatcaggcccgtgctgccgtcgcgacgctggaaaagtgccgggcgggcaaagag
tctttcgagaaggccgatgccgccctcaagtccctgcgtgaaaaggaacgggcaagtcgt
tccctggagcggcatattgcccagttggagaaggattccctggctatcggccagagactt
gaacacgagaacaacgaagtgcagaaagccgggcaggaactcgacgcggaacagcagcgg
ctggcggccgcccgcaaggagcttcagcccgatgccgcacttgtcgagacagccgcgggc
ttaaagactctgaggcaggaggccgaggcgctgcgtacccgccgcggattgttgacgggg
cgccgtgtcgctctggcggaaggacaggaaaaactcgccgaaggggtctgcccgtttttt
gccgaaccgtgccggaatatcgaaggacagcaaccccgtgacgttttcagtcataaaatg
acgcaactcgacgcacaggtcgctgaactggatgcccggatcgaaaaaaatgtccaagac
agtgccactgcggaaaaagcccggcaggcgctggatgctttgaaggtgcgcagtgccgaa
ctcgacaagcagcaaacgcaactcgaatcccgccggcaagccaacgccgggcgcgccgac
ggtcttgccgcccttcaggagcggcaggccaaagccgtcgaaagtcttgaagagcgtcgt
aaggagcgtaaggcttttgacggcctggaggaggcattgctgcggactgagcaggagagg
gcgacctaccagacggcacgggatagcttttacgcccatgccaaagatgccggcgagcta
gacgcgcggcagaagaccctgacccgctggcagcatgccctcgacgggctggtagaggat
cggaaggccaaacttgcagagcgcgaccgctgtcaaaaggcatacgatccctcccagcat
caacgcacccggcagcaaaaagaacaacgggtcggcgagattgccgggctgcaacaacgc
atcaaggggctggaaaaagacgatgagcgtttgaccgccgacattacccggttaaagcag
ctgcaaaaactcattgccgagcgcctggagcaaaagaagcattacgaggagcaggagcaa
ctggtcaagtatctgcgcaatcgcgtcttccgcaatgtctccaaccgactctccgaacgt
ttccgcgaggagatcagccagcgggccgatcgcatttatcgcaccattgccgaaggcgat
gaagagctgctgtggggggataactaccaggttgtgctgcgcgatatggccgacgggcag
ttgcgcgagcgcaccgacgatcagctctccggcgggcagatgatgagcgccgtggtcgct
ctgcggctggcgttgctgcagaccatcggcgcgcgggtagccttctttgacgaaccgacc
tccaatctcgacgccgcccgccgcgaaaacctggcgcacgctttccgcgccatcgatgtg
ggccgtgaggaggtgaccgagcattggtacgatcagttgttcctggtcagccacgatgtc
gccttcacggagattaccgatcagatgataccgttgggagaataa
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