Syntrophotalea carbinolica: Pcar_1455
Help
Entry
Pcar_1455 CDS
T00285
Symbol
ihfB-1
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pca03032
]
Pcar_1455 (ihfB-1)
03036 Chromosome and associated proteins [BR:
pca03036
]
Pcar_1455 (ihfB-1)
03400 DNA repair and recombination proteins [BR:
pca03400
]
Pcar_1455 (ihfB-1)
DNA replication proteins [BR:
pca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Pcar_1455 (ihfB-1)
Chromosome and associated proteins [BR:
pca03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
Pcar_1455 (ihfB-1)
DNA repair and recombination proteins [BR:
pca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
Pcar_1455 (ihfB-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_bac_2
HTH_78
Motif
Other DBs
NCBI-ProteinID:
ABA88701
UniProt:
Q3A4K6
LinkDB
All DBs
Position
complement(1700355..1700633)
Genome browser
AA seq
92 aa
AA seq
DB search
MNKSELIDALAEKKGLTYKRAEEIVNIVLDTMSDTLVEGGRIEIRGFGSLVVKDYKAYIG
RNPKTGEEIEVKPKKLPFFKVGKELRERINKS
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagtcggagttaattgatgccctggcagaaaaaaaaggcctgacttacaaaaga
gctgaagaaattgtgaatatcgttctcgataccatgtcggacaccctggtcgaagggggg
cgcatagaaattcgaggattcggcagcctggtggtaaaggattataaagcctacatcggc
cgcaacccgaaaaccggcgaagagatagaggtcaaacccaagaaactgccattcttcaag
gtgggcaaggaactcagggaacgcatcaacaaaagctga
DBGET
integrated database retrieval system
