Syntrophotalea carbinolica: Pcar_1516
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Entry
Pcar_1516 CDS
T00285
Name
(GenBank) calx-beta domain repeat and Amb_all domain protein
Organism
pca
Syntrophotalea carbinolica
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Big_7
Big_13
Beta_helix
Activator_LAG-3
TSP3_bac
TcfC
Cadherin
Motif
Other DBs
NCBI-ProteinID:
ABA88762
UniProt:
Q3A4E5
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Position
1774859..1777954
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AA seq
1031 aa
AA seq
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MRRKSLLKNLSTMGGLICVLLLVMQMAIPARAAAATGSFEFDASSYSVDEGAGQANVLLK
RVGGASGSATVQVRTLSDTTDWKTDYESFSWTTVSFADGQTQKTVSVVINDDAEQESSET
LNVLLRKPSDGTTLGTVTSTAVTIVDNDSLPGSFEFAQAGYSVAEDGGTVDVLLKRVGGT
SGAATVGVRTMGVTADYATDYSSFSWTTVNFADGETQKPISIAVTDDAAVEDNETFTVLL
QNPTGGTSLGSVTEATVTIVDNDEAEAPVSTEPGSFEFAAAGYSVAEDGGTVDVLLKRVG
GTSGAATVEVRTLGVTADYATDYSSFSWTTVNFADGETQKPISIAVTDDAAVEDNETFTV
LLQNPTGGTSLGSVTESTVTIVDNDEAAVGDTTAPVAAITTPLSGLEVTSAQTLTIVAEA
SDNVAVSKVEFYDGSNLIGTDTTNTYSASLDVSETDNGTHNLTVVAYDEAGNQTTSSPVT
VTVNIASASTEPGSFEFSAAAYSVDEDGGTVDVLLKRVGGTSGAAAVEVRTLGVTADYAT
DYSSFSWTVVNFADGESQKTISIGITDDALAENDETFTVLMQNPTGGTTLGAVTESTVTI
VDNDIDSGTTVNPDLGYLPTFPGAEGYGTETGGGRGGQIIKVTNLNDSGTGSLRAAIQAS
GARIVVFEVSGIIELQSELIITNPYITIAGQTAPAPGIMLKNRRLKVSAHDVVIQHIRVR
PGDERSYNTSEEGERDCLGIVGHSDIYNVVVDHCSFQWAVDEVIGLWGYSNSRLDNITIS
NCIVSEGLDNSIHPEGAHSKGFLIGDYAKKVTVLRNLISSSDDRNGPNAKGGTTSVVINN
YVYNAGRSGRMHYSDSYNAGTLFQSTVGNVFRDGPEYATQAPLWWADNTKSGSQVYASDN
LIQRLDESVASVPLMDPPSWGNPQVSTPPVPYDNVTILPTSSVKSYVLQNCGARPAERGT
SAGDSLDERVINDVWNGSGAMIDTPAQGGGWPTYAKNTRQFVAPANPNGDDDGDGYTNIE
EVLHQMAAAVE
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgagaagaaaatccttactaaaaaatctatctaccatgggagggctgatttgtgtgctg
ttgcttgtcatgcaaatggctattcccgcaagagctgcggcagcaaccggaagctttgag
ttcgatgcaagcagttactctgtcgatgaaggcgccggtcaggccaatgttcttttgaag
cgtgtcggtggcgcgtccggttcagcaaccgttcaggtacgtactctgtcggatactacc
gattggaaaaccgattacgagagtttctcctggaccacagtcagctttgccgatggccag
acccaaaaaaccgtcagcgttgtcattaacgatgatgcggagcaggaatccagcgaaacg
ttgaatgttttgttgcgaaaacccagcgacggaacgacgctcggcaccgttaccagtact
gcggtaaccattgtcgataacgactccttgcccggcagtttcgaatttgcgcaggccggc
tattctgttgctgaagacggcggcacggtcgatgttttgctgaagcgggttggcggtact
tccggtgcggctaccgtcggggtgcgtaccatgggggtgacggctgattatgccactgac
tacagcagtttttcctggaccacggtgaattttgccgatggcgaaacccagaagcctatc
agcattgccgttaccgacgatgcagcggtggaagacaacgaaacttttaccgtgttgttg
cagaatcccaccggtggcaccagtctcggttctgtgaccgaagccaccgtaaccattgtt
gacaacgacgaagcagaggctcctgtctccacggagccgggtagtttcgagtttgcggcg
gccggttactctgtcgctgaagacggcggcacggtcgatgttctgctgaagcgggttggc
ggtacttccggtgcggctaccgtcgaggtgcgcaccctgggcgtgacggccgattacgcc
actgactacagcagtttttcctggaccacggtaaattttgccgatggcgaaacccagaag
cctatcagcattgccgttaccgacgatgcagcggtggaagacaacgaaacttttaccgtg
ttgttgcagaatcccaccggtggtaccagtctcggttccgtgaccgaatccaccgtaact
atcgtcgataacgacgaagcggcggttggcgataccacagcaccggttgcagccattacc
acacctttgtcgggccttgaagtgaccagcgctcagactttgaccatcgtggccgaagcc
agtgacaatgttgccgtcagtaaggttgaattttatgacggaagcaacttgattgggacc
gataccaccaatacttactcggcttcattggatgttagcgaaaccgataacggtacgcat
aatcttaccgttgttgcctatgacgaagcgggcaatcagaccacgtcttcgcctgtaacg
gtaaccgtcaatattgcctccgcctccacggagccgggtagttttgaattttcggcagcc
gcttattccgtcgatgaagatggcggcacggttgatgtactgctgaagcgggtcggcggt
acttccggcgcagccgccgtcgaggtgcgtaccctgggtgtgacggccgattacgctacc
gactacagcagtttttcctggaccgtggtgaacttcgccgacggcgaaagccagaagacc
atcagtatcggcattaccgacgatgctttggcggaaaatgacgaaacctttaccgtattg
atgcagaatcccaccggcggaacgaccttgggggcggtgaccgaatcgaccgtaaccatt
gtggataacgatatcgattccggcacgaccgtgaatccggatctgggttatttgccgact
ttcccgggtgccgagggctatggtaccgaaacgggtggcggccgaggcggtcagatcatc
aaggtcaccaatcttaacgacagcggtacgggatctttgcgtgccgccatacaggccagc
ggcgctcgaatcgtggtgtttgaagtctccggcattattgagctgcagagcgagctgatc
attaccaacccctatatcaccatcgccggtcagaccgctccggctccgggcatcatgttg
aaaaaccggcggcttaaagtatccgcccatgatgtggtgattcagcatatccgcgtacgt
ccgggcgatgagcgctcctacaacacttccgaagaaggggaacgggattgcctggggatc
gtcggtcattcggatatctacaacgttgtggttgaccattgctcctttcagtgggcggtc
gacgaggtcatcgggctgtggggatatagcaacagtcgactggacaacatcaccatttcc
aactgcattgtcagcgaaggtctggataactcgattcacccggaaggcgcccactccaaa
gggttccttatcggtgactatgccaagaaggtaaccgtactgcgcaacctgatttcttca
agcgacgaccgcaacggcccgaacgccaagggtggcaccacctcggtggtgattaataac
tacgtgtacaatgccggccgcagcggtcgcatgcactacagcgattcctacaatgccggg
accctgtttcaatcgaccgtcggcaatgttttccgggatggtccggagtatgcgacccag
gctccgctgtggtgggccgacaataccaagtccggttcgcaagtctacgcctcggataac
ctcatacagcggcttgacgagtcggtggcttccgtaccgctgatggatcctccgtcctgg
ggcaatccgcaggtgtcgacgccgccggtgccctacgacaacgtcaccatccttccgacg
agcagtgtcaaaagctacgtattgcagaactgcggagcgcgacctgccgagcgtggaacg
agtgccggcgacagtctcgacgagcgggtcataaatgacgtctggaacggcagcggggcc
atgatcgacacccctgcccagggcggcggttggccgacatatgctaagaacacccggcag
tttgtcgcgcctgccaatcccaacggcgacgacgacggagacggctacaccaatatcgag
gaagtattgcatcagatggctgccgctgtcgaataa
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