Syntrophotalea carbinolica: Pcar_1559
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Entry
Pcar_1559 CDS
T00285
Symbol
truB
Name
(GenBank) tRNA pseudouridine 55 synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pca03016
]
Pcar_1559 (truB)
Enzymes [BR:
pca01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Pcar_1559 (truB)
Transfer RNA biogenesis [BR:
pca03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Pcar_1559 (truB)
Prokaryotic type
Pcar_1559 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ABA88804
UniProt:
Q3A4A3
LinkDB
All DBs
Position
1824265..1825185
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AA seq
306 aa
AA seq
DB search
MNGILIVDKPQGMTSHAVVGRIRRLFGLRKVGHAGTLDPLATGVLVVALGQATRILQFLM
QENKVYRASLVLGKTTDTQDSEGQIVATSDPGHIDAQSVADVCHSMVGSYDQMPPMYSAL
KKDGVPLYKLARQGVEVSRKPRRITIFDLQLLAVEPPNITFDVHCSKGTYVRTICHDIGV
KLGCGAHLTALRRLRSAPFDVKEAVTLEAIELMAPEDRPELLLSIAEALREYPSLNVCPE
GIKRLGYGIPPTADMIADTIDFEEGTQVLLVGPGGALAMATYVPSRARESRGDFELLRVF
NDGGSS
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaacggtatccttattgtcgataagccgcaggggatgacctcccatgctgtggtagga
cgtatcaggcgcctgttcggtttgcgtaaggtcggacatgccggtaccctcgaccctctg
gctaccggtgtcttggtagtggccctcggtcaggctacccggatccttcagttccttatg
caggaaaataaggtttaccgcgcgtcgctggttctcggcaagaccaccgatactcaggat
tccgaagggcagattgtggctaccagcgatccgggacacatcgatgcgcagtctgtagcc
gatgtctgtcatagcatggttggcagttacgatcagatgcctcctatgtattcggcgctg
aaaaaggatggggtgccgctatataaactcgccaggcaaggtgtggaggtcagccgcaaa
cccagacgtatcacgatttttgatctgcaattattggctgtcgagcctccgaatatcacc
ttcgatgtgcattgttcgaaggggacttatgttcgtactatctgccatgatatcggtgtt
aaactcggttgcggcgcacacttgacagctctgcgacgtctgcgaagcgctccttttgac
gtcaaggaagccgtcaccctggaagccattgaattgatggctcctgaggatcgtccggaa
ctgcttttgtcgattgccgaagcgcttcgggaatatccgtccctgaatgtttgcccggag
ggtataaaacgtcttggttacggcattcctcccacggcggatatgatagcggatacaatc
gatttcgaagagggaacccaggttttacttgtgggtcccgggggagcgctcgccatggcg
acatacgtgccttcgagggcgcgggaaagccgtggcgattttgagttgttgcgggttttt
aatgatggcggtagctcttaa
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integrated database retrieval system
