Syntrophotalea carbinolica: Pcar_1561
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Entry
Pcar_1561 CDS
T00285
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Pcar_1561 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pca03019
]
Pcar_1561 (pnp)
03016 Transfer RNA biogenesis [BR:
pca03016
]
Pcar_1561 (pnp)
Enzymes [BR:
pca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Pcar_1561 (pnp)
Messenger RNA biogenesis [BR:
pca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Pcar_1561 (pnp)
Transfer RNA biogenesis [BR:
pca03016
]
Prokaryotic type
tRNA degradation factors
Pcar_1561 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_NusA_2nd
S1_TP0910
KH-I_KHDC4-BBP
S1_RRP5
PCB_OB
S1_2
Motif
Other DBs
NCBI-ProteinID:
ABA88806
UniProt:
Q3A4A1
LinkDB
All DBs
Position
1825757..1827856
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AA seq
699 aa
AA seq
DB search
MAYQKVECQFNGQTLTLETGKMARQADGAVVVSFGGTKVLCTAVSAKQMREGQSFFPLTV
NYQEKFYAGGKIPGSFFRRERGATERETLVCRLIDRPLRPLFPKGYMFETQIMPTVISVD
EQNDPDTLAMVGASAAIAVSDIPFDGPVAAVRVGRVEGNLIANPTIEQRAESDMDIIVSG
SRDAIIMVEGETRFISEQEMLDALFFAHEAIQPLIDVQLELVKIAGKEKREFSVPEIDPA
VVEKVAELAETRLSEAVKIRTKQDRYAAVAEIKTEILETLAADFEDQEDDISEAFGNLQK
RLVRQMVARDKVRIDGRDKNTIRPITCEIGLLPRAHGSALFTRGETQALVAAALGTSKDE
QRMDNVQSMEFKKFMLHYNFPPFCVGETSMRLFPGRREIGHGMLAERSIAQVLPNHDDFP
YTLRVVSDILESNGSSSMASVCGASLALMDAGVPVSEAVAGIAMGLIKEGDDIVVLSDIL
GDEDHLGDMDFKVTGTREGITALQMDIKIKGVSKEIMQQALEQAREGRLHILDKMAEAIT
APRSDLSPYAPRITTIQVKPDQVRTVIGPGGKNVRGIIEATGCAIDIEDDGRINIASADG
DACKAAIKMIRNLTQEAVVGKLYMATVKKIMEFGAFVEIFPGTEGLVHISELAKERVKKV
TDILQEGDQVLVKCLDIDRQGKIKLSRKEALGQSLPEEG
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ttggcttatcaaaaagtagaatgtcagttcaatgggcagacacttacccttgaaaccggc
aaaatggcccgtcaggccgatggtgccgtggttgtcagcttcggcggcaccaaagttctg
tgtactgccgtcagtgccaagcagatgcgcgaaggacagagctttttccctcttaccgtc
aattatcaggaaaaattttatgccggtggcaaaattcccggctctttcttccgccgggaa
cgtggcgccactgagcgcgaaaccctggtgtgtcgtctgatcgacagacccttgcgacct
ctttttcctaaaggatatatgtttgaaacccagatcatgccgactgtgatctcggttgac
gaacagaacgatcccgacaccttggctatggtcggcgcttccgctgccatcgccgtatcc
gacattcccttcgacgggcctgttgctgccgttcgtgtcggtcgtgtcgaaggtaatttg
atcgccaatccgaccattgagcagcgagccgaaagcgatatggatattatcgtttccggt
tcccgcgatgccatcattatggtcgagggcgaaacacggtttatcagcgagcaggaaatg
ctcgatgcgctgttcttcgctcatgaggcgattcagcctctgatcgatgttcagcttgaa
ctggtcaaaatcgccggtaaggaaaaacgcgaattttccgtgccggaaatcgatcctgcg
gttgtggaaaaggttgcggaactggcagaaacccgtctgtccgaagctgttaaaatccgt
accaagcaggaccgttatgctgctgtggcagaaatcaaaacggaaatactggaaaccctg
gccgccgattttgaagatcaggaagacgatataagcgaggctttcggcaatttgcaaaaa
cgccttgtgcgtcagatggtcgctcgcgacaaggtccgtatcgatggccgcgacaagaat
accattcgtccgattacatgcgaaatcggtctgttgccccgcgcccatggcagtgccttg
tttacccggggagaaacgcaggcgttggtggctgcagcccttggtacctccaaagacgag
cagcgcatggacaatgtgcagtctatggaatttaaaaaattcatgctgcactataacttt
ccgccgttctgcgtaggcgaaaccagcatgcgcctgtttcccggacgtcgtgaaatcggc
catggtatgcttgccgagcgctctattgcgcaggtgttgcccaaccacgatgacttcccc
tatacgctacgcgttgtctccgatatcctggagtccaacggctcttcttccatggccagt
gtctgcggtgcctctctggcgctgatggatgccggtgtacctgtcagcgaagccgttgcc
ggtatcgctatggggctgatcaaagagggcgatgatatcgtcgttctttcggatatcctt
ggcgacgaagaccaccttggcgatatggacttcaaggtcaccggtacccgtgaagggatc
accgctctgcagatggatatcaaaattaaaggtgtcagcaaggaaatcatgcagcaggca
ctggagcaggccagggaaggtcgtcttcacattctggataaaatggcggaagccatcacc
gctccgcggagcgatctgtcgccctacgcgccgcgcatcacgaccatacaggttaaaccg
gaccaggtgcgtaccgttatcggaccgggcgggaaaaacgttcgcggaattatcgaagca
acggggtgcgccatcgatatcgaagatgatggccgtatcaacatcgcttcggcggatggg
gatgcctgcaaggccgccatcaaaatgatccggaatctcactcaggaggccgttgtcggc
aagctttatatggcgaccgtcaaaaagatcatggaattcggtgcgtttgtggagattttc
cccggcacggaaggcctggtgcatatttccgaactggccaaggaacgtgtcaaaaaggtc
accgatattttgcaggaaggtgatcaggttcttgttaaatgcctggatatcgaccggcaa
ggcaagatcaagttgtctcgtaaggaagccttggggcaatccctgccggaagaagggtaa
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