Syntrophotalea carbinolica: Pcar_1612
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Entry
Pcar_1612 CDS
T00285
Symbol
carB
Name
(GenBank) carbamyl-phosphate synthase, large subunit lipoprotein, glutamine-dependent
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00220
Arginine biosynthesis
pca00240
Pyrimidine metabolism
pca00250
Alanine, aspartate and glutamate metabolism
pca01100
Metabolic pathways
pca01110
Biosynthesis of secondary metabolites
pca01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
Pcar_1612 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
Pcar_1612 (carB)
00220 Arginine biosynthesis
Pcar_1612 (carB)
Enzymes [BR:
pca01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
Pcar_1612 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
RimK
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
ATP-grasp_5
ATP-grasp_2
Epimerase
DUF6003
Motif
Other DBs
NCBI-ProteinID:
ABA88856
UniProt:
Q3A451
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Position
complement(1882710..1885964)
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AA seq
1084 aa
AA seq
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MPKRTDIQKILIIGAGPIIIGQACEFDYSGTQACKALKEEGYTVILLNSNPATIMTDPET
ADRTYVEPVTPEVLEKIIEAERPDAILPTLGGQTALNTAVAAAQNGVLERYGVELIGASL
PAIEKAEDRTLFKEAMAKIGVAVPRSGLAHSYEEAMKIIEYVGYPAIIRPSFTLGGTGGG
IAYNREEYEALALGGIDASPTDEILVEESIIGWKEFELEVMRDKADNVVIICSIENFDAM
GVHTGDSITVAPAQTLSDKEYQLLRDASIKIIREIGVDTGGSNIQFAINPVDGRLAVIEM
NPRVSRSSALASKATGFPIAKIAAKLSVGYTLDEIPNDITQETFASFEPTIDYVVTKIPR
FTFEKFPQADSTLTTQMKSVGEAMSIGRTFKESLQKGLRSMEIGSYGFESRLYNSPAEWG
SPLDDAARELLNTKLHVPNWERIWYVADAFRAGMDIPQIYTATGIDPWFLFQIQQIIEME
EQLVKLVELPATATEWPELLREAKQNGFSDRRLAQLWGKTEDEVRQLRLDMNIHPVYKRV
DTCGAEFIAHTPYLYSTYETECEAMPTDRKKIMILGGGPNRIGQGIEFDYCCVHGVMALA
EDGYETIMVNCNPETVSTDYDTSDRLYFEPLTFEDVLEIVHIEKPVGVIVQFGGQTPLKL
AVSLEKAGVPIIGTSPDAIDRAEDRERFQALLFKLNLLQPDNGLARSFDEAEKIAERIGY
PVVVRPSYVLGGRAMEIVYHVDALRNYMQNAVQASPDHPILIDKFLEHAIEVDVDALCDG
KSVVIGGIMQHIEEAGIHSGDSACALPPFSLKPEIVDEIRRQTRELALELGVVGLMNIQY
AVKEDTIYLLEVNPRASRTVPFVSKATNRPLAKLAARVMAGKTLEDLQVHDEIIPSYISV
KEAVFPFVKFPGVDTLLGPEMKSTGEVMGIDTNLYRAFAKAQLAAGVILPVKGKVFISLK
DGDKQTFLEPARRLVEGGFSLVATRGTASFLEANGLPVTAINKVKEGRPHCVDALKSKEI
DMVFNTTFGPQSVSDSYSIRRTALMYNIAYYTTLEGIIAAVDAVLSLGREKLDVVPLQEY
YSGQ
NT seq
3255 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagaacagatattcagaaaattctgattattggcgccgggcccattattatc
ggccaggcctgcgaattcgattattccggaacccaggcctgcaaggctctcaaagaagag
ggatacaccgttatccttttgaattcgaacccggccaccatcatgaccgacccggaaaca
gcggatcggacctatgtggagccggttacaccggaagtcctcgagaaaatcattgaagca
gagcgtcccgacgccattttacccactctcggtggccagaccgcattgaataccgccgtc
gccgcggcccaaaacggtgtactcgaacgctacggcgtggaattgatcggtgccagtctg
ccggctattgaaaaagccgaggaccgcaccctgtttaaagaagccatggccaaaataggc
gtagccgtaccccgatccggcctcgcccacagttatgaagaagcgatgaagatcatcgag
tatgtcggctatccggccattattcgtccttcttttaccttgggcggaacgggcggcggt
atcgcatacaaccgtgaagaatatgaagcgctggcactcggcggcatcgatgcttctccc
accgatgagattctggtggaagagtcgatcatcggttggaaagaattcgagcttgaggtc
atgcgcgacaaggccgacaatgtcgtcatcatctgctccatcgaaaacttcgatgccatg
ggcgttcataccggcgactccatcaccgtggcgccggcgcagaccctgtccgacaaggaa
taccagcttttgcgcgatgcctccatcaagatcatccgcgaaatcggggtcgacaccggc
ggttccaatattcagttcgccatcaaccccgtcgacggacgcctggcggtcatcgagatg
aacccccgggtatcgcggtcgtcggccctggcatccaaggcaacgggttttcccattgct
aaaattgccgcaaaattatccgtgggttacaccctggatgagattcccaacgatattacc
caggaaacttttgcttccttcgaaccgaccatcgattatgtggtcaccaagattccgcgt
tttactttcgagaaatttccccaggccgacagcacactgaccacccagatgaagtcggtg
ggagaggccatgtccatcggcaggacgtttaaagaaagcctccaaaagggtctgcgttcc
atggaaatcggatcctacgggttcgaaagtcgcctctacaactctcctgcagagtggggt
tctcccctggatgatgccgcccgggaactgctcaataccaagctgcatgtaccgaactgg
gagcgtatctggtatgtcgccgacgcattccgcgccggtatggatattccgcagatttat
accgccaccggtatcgatccctggttcctctttcagatccagcagatcattgagatggaa
gagcaactggtcaaattggtcgaattgcccgctaccgccaccgaatggcctgaattgttg
cgcgaagccaagcaaaacggattttccgatcggcgtctggcgcaactttggggcaaaacg
gaggacgaggtacgtcaactgcgccttgacatgaacattcatcccgtttacaagcgcgtt
gacacctgcggtgccgaattcatagcccatacgccgtatctttattcgacttatgaaacc
gaatgcgaagcgatgccgactgaccgcaaaaagatcatgattctcggcggcgggcccaat
cgaatcggtcaaggcatcgagttcgattactgttgcgttcacggcgttatggccttggct
gaggatggttacgaaaccatcatggtcaattgcaaccctgaaaccgtttccaccgactac
gatacatccgaccgactttatttcgaacctttgacttttgaggatgtcctcgagatcgtc
catattgaaaagcctgtgggcgtcattgtgcagttcggcggtcagactcctttgaaactg
gccgtgtcgctggaaaaagccggcgtccccatcatcggcacttcacccgatgctatcgac
cgcgccgaggaccgcgagcgctttcaggcactgttattcaagctcaacctgttgcaaccc
gacaatggtctggcacgctccttcgacgaagctgagaagatcgctgaacgtatcggttat
ccggtcgttgtgcgtccttcctacgttctcggcggtcgcgccatggaaatcgtctaccat
gtcgatgccttgcgcaattatatgcaaaatgccgtgcaggcctccccggatcatccgatt
ctgatcgataaatttctcgaacatgccatcgaagtcgatgtcgatgctctgtgcgacgga
aaaagcgtcgttatcggcggtatcatgcagcacatcgaagaggccggcattcactccggc
gactcggcatgcgcattgcctccgttctctctgaaacccgagattgtcgatgaaatccgc
cgtcagacccgggagcttgccttggagctcggtgtcgtcggcttgatgaacattcaatac
gctgtcaaggaagacaccatttatctgctcgaagtcaatccgcgcgccagtcgcacggtg
ccgtttgtatccaaggcgaccaatcgaccactggccaaactggctgcacgggtcatggca
ggaaaaactctggaagatctccaggtccacgatgagatcattccgtcctacatctcggtc
aaggaagccgtcttcccctttgtcaagttccccggggtcgatacgctgctcggtcccgaa
atgaaatcgaccggtgaggtcatgggaatcgacaccaacctgtatcgggcctttgccaag
gctcagctggcggccggagtgattctgcctgtcaaaggcaaggtctttatcagcctcaag
gatggcgacaagcaaaccttccttgagccggcacggcgcctggttgagggtggtttttcc
ctggttgcaacccgtggaacagcttctttcctcgaggccaacgggcttccggtaaccgcc
atcaacaaggttaaagaaggtcgcccgcattgtgttgatgcactgaaaagcaaagaaatc
gacatggtattcaacaccactttcgggccgcaatccgtatccgattcctattccatccgg
cgtacggccctgatgtacaacattgcctactatacaaccctcgaaggcatcattgccgcc
gtggatgccgtactgtctctgggacgagaaaagcttgacgttgttcctctccaggagtat
tattcagggcaatag
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