Syntrophotalea carbinolica: Pcar_1657
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Entry
Pcar_1657 CDS
T00285
Name
(GenBank) outer membrane protein, OMP_b-brl domain-containing
KO
K03286
OmpA-OmpF porin, OOP family
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_1657
Transporters [BR:
pca02000
]
Other transporters
Pores ion channels [TC:
1
]
Pcar_1657
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl
TSP_3
OprF
OmpA_membrane
OmpW
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
ABA88901
UniProt:
Q3A406
LinkDB
All DBs
Position
complement(1935054..1935926)
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AA seq
290 aa
AA seq
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MVMRQKNLLFYALFLFVFTSTLSGTAMAENKYHVFTVSPYVGGRLVEGNQALDDSINAGL
AVGYNFSEIWSVEGVLAYSPSEYVGRDVHLLDAHVDVLYHFRPFGRLVPYLAGGAGALFI
KPEGQSSDDDLQLNFGGGVKYFITENLALRGDIRPTLDINVGDSAHQSDTYWNLVCSAGV
VFQLGTPQETREYLDTDGDGVLDAVDECLETPPGVAVTRRGCSRDADRDGVPDYRDLCPE
TAEGVTVTAAGCPAPTRGDRDADGVEDALDHCPETPFGTPVNAVGCPLDR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggttatgcgtcaaaagaacttgttgttttatgctctttttttgttcgtattcaccagt
acgctgtctggtaccgcaatggctgaaaataagtaccatgtctttactgtctcgccatat
gtcggtggtcgcctggtcgaaggtaaccaggcgctcgacgattcgatcaacgccggcctt
gccgtcggctataatttttccgagatttggagtgtcgaaggggtcctggcttactcgcct
tcagaatatgtaggacgggatgttcatttattggatgcacacgtcgatgttctataccat
ttccgtcccttcgggcgtctggttccctatcttgccggcggtgccggtgccctgttcatc
aagccggaagggcagagttcagatgacgatctccagctgaattttggcggcggcgtcaag
tatttcattacagaaaacctggccttgcggggtgacatccgtcccaccctggacatcaat
gtcggtgattccgctcatcagtctgacacatattggaacttggtatgttcggcaggggtg
gttttccagcttggtacgcctcaggaaacgcgggaatatctcgatacggatggcgatggc
gtgttggatgcggtggacgagtgcctggaaactcccccgggagttgccgtgactcgccgt
gggtgctccagggatgccgatcgcgatggggttccggattatcgcgacctctgtccggaa
acggctgagggggtgaccgtaaccgcggcagggtgtcctgcaccaacgcgaggcgaccgc
gatgcggatggcgttgaagatgcgcttgaccattgtcccgaaacgcccttcggcacaccg
gtaaacgctgtcgggtgccccctggatcgctga
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