Syntrophotalea carbinolica: Pcar_1669
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Entry
Pcar_1669 CDS
T00285
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Pcar_1669 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pca03400
]
Pcar_1669 (xseB)
Enzymes [BR:
pca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
Pcar_1669 (xseB)
DNA repair and recombination proteins [BR:
pca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
Pcar_1669 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
Phage_HK97_TLTM
Motif
Other DBs
NCBI-ProteinID:
ABA88913
UniProt:
Q3A3Z4
LinkDB
All DBs
Position
complement(1949689..1949913)
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AA seq
74 aa
AA seq
DB search
MDKPDTFEEALRSLEAVVEKLEAGELSLEESLTSFEVGVKCANRCQELLKSVETQVETLL
RKQDGSLAIGKFEE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atggataaacctgacacatttgaagaagcgctgcggtccctggaggccgttgtggaaaag
cttgaagccggggagttgtccctggaagagtccctgacatctttcgaggtcggcgtaaag
tgtgccaaccgctgtcaggaacttctgaagtcggtcgaaacccaggtggaaaccctgctt
agaaaacaggacggttccctggccattggcaaattcgaagaataa
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