Syntrophotalea carbinolica: Pcar_1686
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Entry
Pcar_1686 CDS
T00285
Symbol
hup
Name
(GenBank) histone-like protein
KO
K03530
DNA-binding protein HU-beta
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pca03032
]
Pcar_1686 (hup)
03036 Chromosome and associated proteins [BR:
pca03036
]
Pcar_1686 (hup)
03400 DNA repair and recombination proteins [BR:
pca03400
]
Pcar_1686 (hup)
DNA replication proteins [BR:
pca03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Pcar_1686 (hup)
Chromosome and associated proteins [BR:
pca03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Pcar_1686 (hup)
DNA repair and recombination proteins [BR:
pca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Pcar_1686 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
YqbF_HeH
HU-DNA_bdg
DUF4836
DUF937
DUF2267
DUF695
Motif
Other DBs
NCBI-ProteinID:
ABA88929
UniProt:
Q3A3X8
LinkDB
All DBs
Position
complement(1968003..1968275)
Genome browser
AA seq
90 aa
AA seq
DB search
MTKADLVNAMAEKAGLSKAETEKAIKAFTDVITEALKAGEKVALVGFGTFSVGERAARVG
QNPQTGEKMNIPAAKVPKFKPGKALKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaaagccgatcttgtcaatgcaatggctgagaaagcagggcttagcaaagccgaa
accgaaaaagccatcaaggcatttaccgatgttattactgaagctctgaaagccggagaa
aaagtagcgctggtcggatttggcaccttcagcgtcggtgaacgagctgctcgtgtaggg
cagaatcctcaaaccggcgaaaagatgaatatccctgccgctaaggttcctaagttcaag
cctggcaaggcactgaaagactctgttaactaa
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