Syntrophotalea carbinolica: Pcar_1864
Help
Entry
Pcar_1864 CDS
T00285
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Pcar_1864 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pca03400
]
Pcar_1864 (mutM)
Enzymes [BR:
pca01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
Pcar_1864 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Pcar_1864 (mutM)
DNA repair and recombination proteins [BR:
pca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Pcar_1864 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
PSMbeta
Motif
Other DBs
NCBI-ProteinID:
ABA89105
UniProt:
Q3A3F2
LinkDB
All DBs
Position
complement(2178315..2179130)
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETIRRGISPWVIDQKVVAVVVRQPRLRWPVPSNLSACLVGYAFSGVERRAKYL
LLPNPAGCLLIHLGMSGSLRIVPSDTPPAAHDHVDIALESGRTLRLNDPRRFGAVLWIEG
RPEDHALLAHLGPEPFAVEFTGAMLYARSRGRKLAVKNFIMDQRIVVGVGNIYASEALYR
AGIHPMRAAGRVSRRRYAALAEAVRQVLTAAIEAGGTTLRDFTDENGRPGYFSQRLLVYG
REGQPCVHCGRPIRCETIGQRSSYFCTRCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagttgccggaagtagagaccattcgtcgcggcatatcgccctgggtcattgac
caaaaggtggtggccgtggtggtgcgtcagcccaggttgcgctggcctgtgccttcgaat
ctgtccgcatgcctggtcggttatgctttcagcggcgtcgagcggcgggccaaatacctc
ctgctgcccaatccggccggttgtttgctgattcatcttggtatgagcggatctttgcgc
atcgttccgtcggatactccacccgccgcacatgaccatgtcgacatcgctctggaaagc
ggacgcaccctgcgtttgaacgatccccgccgctttggcgcggttttgtggatcgaagga
cgccccgaggaccacgctttgctcgctcatctcggtcccgagcccttcgccgtggaattt
accggagccatgctgtatgcccgttcgcgcggacgcaaactggccgttaaaaatttcatc
atggatcagcgtatcgtggtcggtgtcggcaatatctatgcgagtgaggccttgtaccgg
gccggaatccatcccatgcgggccgcgggaagggtttcccgccgccgctatgccgctctg
gccgaagcggtgcgccaggtactgaccgcagcgatcgaagccggcggcaccacgctacgg
gattttaccgatgaaaacggccgtccggggtatttcagccagaggttgcttgtgtatgga
cgcgagggacaaccgtgcgtgcattgcggccgccccatccgttgcgagaccatcggccag
cgcagcagttacttctgcacgcgctgccagcgttga
DBGET
integrated database retrieval system
