Syntrophotalea carbinolica: Pcar_1892
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Entry
Pcar_1892 CDS
T00285
Symbol
secD
Name
(GenBank) protein export membrane protein SecD
KO
K03072
preprotein translocase subunit SecD
Organism
pca
Syntrophotalea carbinolica
Pathway
pca03060
Protein export
pca03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
Pcar_1892 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
Pcar_1892 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pca02044
]
Pcar_1892 (secD)
Secretion system [BR:
pca02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
Pcar_1892 (secD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SecDF_P1_head
SecD_1st
SecD_SecF_C
MMPL
ACR_tran
Sec_GG
Motif
Other DBs
NCBI-ProteinID:
ABA89133
UniProt:
Q3A3C4
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Position
complement(2206791..2208392)
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AA seq
533 aa
AA seq
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MSKSIKLRGGVVLFCLALSLLALMPTLFPNSSPDWLKKSFDPLHLGLDLQGGMHLVLGVD
VEKAVESRIDGIVDQVETELKEKDIIFKRVSRVGNDRLVVVVYDDEAGKQVDAFMADGGY
RDLEPLTLETQGGYIEKYFRFSSSAVASIQDNAVKQALETLRNRIDQFGVSETVLQRQGS
DRILVQLPGIKDPRRAVDLLGKTALLEFKMVAENIDLQAAAKGVLPPGTQLLYERQVDRR
SGAVTQTPLVVYDKTVLTGDLVSDAQVRIDPRFNEPYVSIDFNAVGAKRFDQITASNVGK
RMAIVLDDTVYSAPFIRERISGGSAQISGSFDEQEATDLAIVLRAGSLPAPVTILENRTV
GPSLGLDSIHRGIWSVIIGCVAVVLAMGIYYNLAGLVANLALVLNLVFIMAMLSLCKASL
TLPGIGGIVLTLGMAVDANVLIYERIREELRLGKSARNALEAGYSKAFLTIMDANITTLI
AALVLFQFGTGPVKGFAVTLSIGIAASLFTAIFVSRVIFDFFLERYQVKRLSI
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagagcatcaagctgcggggaggggttgtactgttctgcctcgctctgtcattg
ttggctttaatgccgactctgtttcccaacagttcccctgattggctgaagaagagcttc
gaccctttgcatctcggactcgatctgcagggcggcatgcacctggttctcggggttgat
gtcgaaaaagcggtcgaaagccggatcgacggcatcgtcgaccaggtggaaaccgagctg
aaagaaaaagacatcattttcaagcgcgtctcccgggtgggtaacgatcgcttggttgtc
gttgtttatgacgacgaggccggcaagcaggtcgatgcctttatggccgacggcggctat
cgcgatctggagcctttaacattggaaactcagggcggttatatcgaaaaatatttccgc
ttttcctcttctgccgtggcgtccatccaggataatgccgtgaagcaggctctcgagacc
ttacgtaaccgcatcgaccaattcggcgtcagtgaaaccgttctgcaaaggcagggcagc
gaccgtattctggttcagttgcccggcatcaaggatccccggcgggccgtggacctgctc
ggcaaaaccgctttgctcgaattcaagatggttgcggaaaacatcgatctgcaggctgcg
gccaaaggggtgttgcctcccggtacccagttgctttacgaaagacaggttgaccggcgc
agtggcgcggtcacccagacgcccttggtggtctacgacaaaaccgtgcttaccggcgat
ctggtctccgatgcgcaggtgcggatagacccccgattcaacgaaccctacgtatcgatc
gacttcaatgctgtcggtgccaagcgtttcgaccagataaccgcttccaatgtcggcaag
cgcatggccatcgtgcttgacgataccgtttattccgcgccgtttatccgcgaacggatc
tccggcggcagcgcgcagatctccggttccttcgacgagcaggaggccaccgatctggcc
atcgtactgcgggccggatcattgcctgcgccggttaccatccttgaaaatcgcaccgtc
ggtccctccctcggtctggattccatccatcgtggtatctggtcggtcattatcggctgc
gtggcggtggtgctggccatgggcatctattacaacctcgccggcctggtggccaacctg
gccctggtactcaacctggtgttcattatggccatgctgagtctgtgcaaggccagtctc
acgctgccaggtatcggcggtatcgtgctgactctggggatggcggtggatgccaatgtg
ctcatttatgagcgtatccgtgaggagttgcggctcggcaagagtgcccgcaatgccctg
gaggccggctacagtaaagcctttttgaccattatggatgccaatatcacgaccctgatc
gctgctttggtgctctttcagttcggcaccggtccggtcaaaggctttgccgtgaccctg
tccatcgggattgccgcgtcgctgtttacggcgatattcgtctcacgtgttattttcgac
tttttcctggaacgctaccaggtcaagcgattgagtatctag
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