Syntrophotalea carbinolica: Pcar_1922
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Entry
Pcar_1922 CDS
T00285
Symbol
lptF
Name
(GenBank) lipopolysaccharide ABC transporter, membrane protein LptF
KO
K07091
lipopolysaccharide export system permease protein
Organism
pca
Syntrophotalea carbinolica
Pathway
pca02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Pcar_1922 (lptF)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pca02000
]
Pcar_1922 (lptF)
Transporters [BR:
pca02000
]
ABC transporters, prokaryotic type
ABC-2 type and other transporters
Lipopolysaccharide transporter
Pcar_1922 (lptF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LptF_LptG
Motif
Other DBs
NCBI-ProteinID:
ABA89163
UniProt:
Q3A394
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All DBs
Position
2237670..2238845
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AA seq
391 aa
AA seq
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MTSLRIQRYLLRETLVPMLLGLAVFTLVLLLGRILNLVELVINKGVPLVDVLLLLAYLLP
TFLVLTLPLSFLLGVMAGFGRMSADREILALKACGVGLRQLTAPIVGLGLLVSLATAATT
IAIKPASEDLFREKLFHIASSRANIGIQAQIFNDEFEGIILYANDVDERSGRMQGVFISD
ERDDTLSSIILANEGRIFSNQENLTLTLHLENGTIHRQRRETGSGFQVIEFTRYDLNLDL
GQTSMSADQPRKNKKTMTLGELYQAIRPDAATPPSKKRELLAEFHWRLAVPVIPLLFALL
GVPLGIQPVRSGRGSGFAAGLLVFLAYYVLLSLAGTLVVDAGLPGLIMWGPNSIFLLASI
VVLRAAAKEKPLPLVEFCRRWTDILIRRLRK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacaagccttcgcatccaacgttatctactgcgcgaaacccttgttcccatgctcctg
ggactggcggttttcaccctcgtcctgcttctgggtcgcatcctcaatctggtcgagctg
gtcatcaacaaaggggtacccctggttgatgtcttgctgttgctcgcctacctgctgccg
acgtttctcgtcctgacactgcctctgtccttcctgctgggggttatggccgggttcgga
cgcatgtccgcggatcgggaaattcttgcacttaaggcatgcggcgtcggattgcgccag
ttgaccgcgccgatcgtaggattgggattactggtgagtctggctaccgctgcgacaacc
attgccatcaaaccggccagcgaagacctgtttcgcgaaaaactgttccatatcgccagc
agtcgcgccaacatcggtattcaggcccaaatcttcaacgacgaattcgaaggcatcatc
ctgtacgccaacgatgtcgacgaacgctccggacgaatgcagggcgttttcatctcggat
gaacgagacgacaccctgtcctccatcatcctggccaatgagggtcggattttttccaac
caggaaaacctgacccttaccctgcacctggaaaacggcaccatacatcgccaacgccgg
gaaaccggcagcggctttcaggttatcgagtttacgcggtacgacctgaatctcgacctc
gggcagacctccatgtcggcggatcaaccacggaaaaacaaaaaaaccatgacgcttgga
gagctataccaggccatccgacccgacgcagcaacgcccccttccaaaaaaagggaattg
ctggccgaattccactggcgcctggctgttcccgtaatccccctgcttttcgccctgctc
ggcgttcccctgggcattcagccggtgcgctccggtcgcggcagcgggtttgccgccggc
ctgctggttttcctggcctattatgtcctgctgtcccttgccggcaccctggtcgtcgat
gccggcttgcctggcctcatcatgtgggggcccaattcgattttccttttggccagcatc
gtcgttttacgtgccgcagccaaggaaaagccccttcccctggtggagttttgccgtcga
tggacggacatcctcatccgccgcctgaggaaataa
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