Syntrophotalea carbinolica: Pcar_1935
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Entry
Pcar_1935 CDS
T00285
Name
(GenBank) P-loop-containing kinase UPF0042
KO
K06958
RNase adapter protein RapZ
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pca03019
]
Pcar_1935
Messenger RNA biogenesis [BR:
pca03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
Pcar_1935
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapZ-like_N
PapZ_C
AAA_18
AAA_33
AAA_22
AAA_28
nSTAND3
AAA
APS_kinase
AAA_16
AAA_24
KTI12
Zeta_toxin
CoaE
AAA_30
ABC_tran
AAA_29
AAA_23
Motif
Other DBs
NCBI-ProteinID:
ABA89176
UniProt:
Q3A381
LinkDB
All DBs
Position
complement(2250191..2251057)
Genome browser
AA seq
288 aa
AA seq
DB search
MKRARLIIITGLSGSGKTTAARALEDEGFFVVDNLPLVLLPEFLKLHAGSAVAGSNVAVV
VDVRNKPYLEGYKQTLAEVRSAGHVVDIFFFDAVDDVLLRRYSETRRRHPLSQKEGVAES
IRQERALLGGIMDLSTEIIDSSWLTPHQLRARVVHMVCGDDKGNPLAVLVQSFGYRYGIP
QGSDLVMDVRFLPNPHFVPDLRPQTGLSQGVRDFVLGQPACREFLDRFNHLLDYLLPSYR
KEGKSYLTISIGCTGGRHRSVAIAEHLRYAIQGEDMVVDGLHRDVAKE
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgcacgtctgattatcatcaccgggttgtccggatccggtaaaaccacagcg
gccagggctcttgaagacgagggtttttttgttgtcgataacctgccgctggttctgctg
cctgaattcctgaagttgcatgccggcagcgccgtcgccggctccaatgtggccgtcgtc
gtcgacgttcgcaataagccgtatctggagggatataaacagaccctcgccgaggtacgt
tcggcgggccacgttgtcgatattttcttcttcgacgccgttgacgatgtccttctgcgg
cgctattcggaaacgcggcgtcgccacccactttcgcaaaaagagggcgtcgccgaatcg
atccgccaggaacgcgccctgcttggcggcattatggatctctccaccgaaattatcgat
tcgtcctggctcacccctcatcaattacgggccagggtggttcatatggtatgcggcgat
gacaagggaaaccctcttgccgtactggtgcagtctttcgggtaccgttacgggattccg
caaggatccgaccttgtcatggatgtgcgtttcctgcccaatccgcatttcgtgccggat
ttgcgtccgcagacagggctttcccaaggtgtccgcgattttgttttgggacagcctgca
tgtcgggaatttttggatcgtttcaatcatctgctcgattatcttttgccctcttaccgc
aaagagggcaaaagctatttaaccatttccatcggctgtacgggtggtcgccatcgtagc
gtcgctattgccgaacatctgcggtatgcgattcagggtgaagatatggtggtggacgga
ttgcaccgcgatgttgccaaggagtag
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