KEGG   Syntrophotalea carbinolica: Pcar_1985
Entry
Pcar_1985         CDS       T00285                                 
Symbol
mcp40H-35
Name
(GenBank) methyl-accepting chemotaxis sensory transducer, class 40H, Cache_2 domain-containing
  KO
K03406  methyl-accepting chemotaxis protein
Organism
pca  Syntrophotalea carbinolica
Pathway
pca02020  Two-component system
pca02030  Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:pca00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Pcar_1985 (mcp40H-35)
 09140 Cellular Processes
  09142 Cell motility
   02030 Bacterial chemotaxis
    Pcar_1985 (mcp40H-35)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:pca02035]
    Pcar_1985 (mcp40H-35)
Bacterial motility proteins [BR:pca02035]
 Flagellar system
  Chemotaxis proteins
   MCPs
    Pcar_1985 (mcp40H-35)
SSDB
Motif
Pfam: sCache_2 dCache_2 MCPsignal Cache_3-Cache_2 HAMP HAMP_2 COG6_N BLOC1_2 Mce4_CUP1 Seryl_tRNA_N ATP-synt_B ATG17_like TelK_muzzle DUF3540 Laminin_II Nuf2_DHR10-like Syntaxin DUF948 Fib_alpha Spectrin COG3_N DUF1664 ChrB_C DUF5798 RIG-I_C
Other DBs
NCBI-ProteinID: ABA89226
UniProt: Q3A331
LinkDB
Position
2312612..2314759
AA seq 715 aa
MKDLKIPAKIFLLSGSIILIFTLVASWLYLHFRNNIMEARRNEIRHVVESAVGQVEHFAR
LDKTGQLTTEEAQARAKAIIQDLRFANDNYFWINDMQPSMVLHPLDPELNGKSLAATEDS
NGMRMFVKITEICRKNGEGFLEYAWHKEGSSKPVGKISFVKRVPQWNWVIGSGLYLDDIQ
KVLSKLFYTTFGILVVVIISSMTLVFFVTRGISRPLNESAEIMEKVGKGDFSLRLNLDRK
DEIGRMAKALNQCISSVGEMFLNIRTMGVQIAVNTLKVSNQVDVSSRNSVEQGTLAQDIF
ASSQQTNAAHAEISSNTQHICASTSNNLETAQNSFQELMETNNSINSMTEKIAGYTVTIG
QMDTESQDIKKIVSLIKSIATQTSLLSLNAAIEAARAGQAGKGFAIVADEVKALAEQVNA
ASEDIADKINNMLAHIETCINETEDISNVASATQAAVSKSCDSFKTMISDLEKSDDQLQS
ITASVEELSAANNEVHGKVDHINQISREVSDTMEEAKDSTEALYQITENLQRMNARYKTG
KGYGEHVVGEVRKARSKIRKNMEKMLERGIDIFDRNYQPVAGTDPQKYQTAYTEAFAKEL
QSIYDKLVSDLKGGVFAVCVDVNGYAATHNSFCSKPCTGDPETDTVHSRHQRIFDDPSSL
AAASSTAPVLLHTYKRDDGEILSEFAMPIYINGKHWGALRFGCDPEVAMDMNFVS
NT seq 2148 nt   +upstreamnt  +downstreamnt
gtgaaggaccttaaaatcccagcaaagatctttctactcagcggcagcatcattctgatt
ttcaccctggtcgcgtcatggctctatcttcattttcgcaacaacatcatggaagcgcgt
cgcaatgaaatccgccacgtcgtagagtcggctgtgggccaggtggaacatttcgcccgc
ctggacaaaacaggccagctgaccaccgaagaggctcaggcccgagccaaagccatcatt
caggatctgcgtttcgccaacgacaactatttctggatcaacgacatgcagcccagcatg
gtcctccaccctctggatccggaactcaacggcaagtcgctggcggccacagaagattcc
aacggcatgcgcatgttcgtaaagataaccgagatttgccgtaaaaacggcgaaggcttc
cttgaatatgcctggcacaaagaaggttcctcaaagcctgtcggtaaaatttcctttgtt
aaaagagtaccgcagtggaactgggtcatcggatccggcctgtatctggacgacatacag
aaggttctgtccaaactgttttacaccacatttggcatccttgtggtggtgatcatctcc
tccatgacattggtctttttcgttacccgcggcatctcccgtccattgaacgagtcggcc
gaaatcatggagaaagtcggcaaaggggatttcagcctgcgtctcaacctcgatcgcaaa
gacgaaatcggacgtatggccaaagccctcaatcaatgcatcagcagcgttggggagatg
ttccttaatatccggaccatgggcgtacagattgccgtcaatacgctcaaagtttccaac
caggtggatgtatcctccaggaattccgtcgagcaaggtacgctggcacaggatattttt
gccagcagccagcaaaccaatgcggcccatgcggaaatatcctccaacacccagcacatc
tgcgcctcaacctccaacaacctggaaacggcccaaaactccttccaggaactcatggag
accaacaacagcatcaactccatgacggaaaagattgccggctacacggtcaccatcggc
cagatggataccgagtcgcaagacattaaaaagatcgtatcccttattaaatccatcgca
acccagacctctttgctgtctctcaacgcagccatcgaagccgcacgcgccggccaggcc
ggcaaaggcttcgccatcgttgccgacgaggttaaagccctggccgagcaggtcaatgcc
gccagtgaagatatcgccgacaaaatcaacaacatgctggcccatatcgaaacctgcatc
aacgaaacggaagatatcagcaacgttgcctcggccacccaggcagcggtcagcaaatca
tgcgacagctttaaaaccatgatctcggatctggaaaagagcgacgatcaactgcagagc
atcacggcttcggtggaagaattgtccgccgccaacaatgaggttcacggcaaagtcgac
cacatcaaccagatcagccgtgaagtatcggacaccatggaagaagccaaggattccacc
gaggctctctaccagatcaccgaaaacctgcagcgtatgaacgctcgctacaaaaccggc
aaaggttatggggagcacgttgtcggcgaggtgcgtaaagcgcgcagcaaaattcgtaaa
aacatggaaaaaatgcttgagcgcggcatcgatatttttgatcgcaactaccagccggta
gccggaaccgatccgcaaaaatatcagacagcctataccgaggcctttgccaaagaactt
cagtccatctacgacaaactggtcagcgaccttaaaggcggagttttcgccgtatgcgtc
gacgtcaacggctatgcggcaacccacaacagcttctgttcgaagccgtgtaccggtgac
cccgagaccgacaccgtccacagccgtcaccagcgtattttcgacgatccgagcagtctg
gccgcggcaagcagcaccgccccggtcttactgcatacctacaaacgggatgacggcgag
attctcagcgaatttgccatgcctatttatatcaatggcaagcactggggggcactgcga
ttcggctgcgaccccgaagtcgccatggacatgaacttcgtttcctga

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