Syntrophotalea carbinolica: Pcar_2145
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Entry
Pcar_2145 CDS
T00285
Symbol
pilR
Name
(GenBank) sigma-54-dependent transcriptional response regulator PilR
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
pca
Syntrophotalea carbinolica
Pathway
pca02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Pcar_2145 (pilR)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pca02022
]
Pcar_2145 (pilR)
02035 Bacterial motility proteins [BR:
pca02035
]
Pcar_2145 (pilR)
Two-component system [BR:
pca02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Pcar_2145 (pilR)
Bacterial motility proteins [BR:
pca02035
]
Pilus system
Twitching motility proteins
Pcar_2145 (pilR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
Mg_chelatase
PDE8A_N
AAA
AAA_2
IIGP
AAA_3
bpMoxR
AAA_22
HTH_50
AAA_7
HTH_30
SLFN-g3_helicase
nSTAND3
ATPase
Torsin
Motif
Other DBs
NCBI-ProteinID:
ABA89384
UniProt:
Q3A2M3
LinkDB
All DBs
Position
complement(2496138..2497616)
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AA seq
492 aa
AA seq
DB search
MSCRGEEQKRIVIPLKKSAMENRQENQHRILVVDDEESMREFLCILLKRDGYLVDAVSDG
QQAVACLKEQNYDLIISDIKMPRLDGFGLLDHVKERFASTAMIMITAFSTAEQAVDAMKK
GAYDYITKPFKNEEIRLVVENALERMDLRRENLQLKKELGQRFSFANIIGKSKVMQGVYD
LIEKVSASKVNVLITGESGTGKELVARAIHYNSDRHDRPFVAIYCGAIPENLLESELFGH
EKGAFTGAVQQKQGLFEVADGGTLFLDEIAELPPMMQVKLLRVIQEHEFRKVGGTRDLKV
DVRLVAATNKDLAQAVTEDQFREDLYYRLNVIQVGLPPLRDRREDIPLLVSHFLQKLTPG
FSTTIPDGVMRRFLDYHWPGNIRELENTVERCVVLGGKGEITEDSLPPHMLCISGTGDQQ
LTELPEEGLDLDDYLGAIEKDILLKALDRTGGVRKRAAELLHITFRSIRYRLAKFGIEAE
GGDERSGLGCDK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
ttgtcatgtcgcggggaagaacaaaaaaggatagttattccattgaaaaagtcggctatg
gaaaatagacaggaaaatcagcatcgcattctcgtagttgatgatgaagagagtatgcga
gaattcctatgcattctcctgaagagggacggatatcttgttgatgctgtaagtgatggt
caacaggcagttgcatgccttaaagagcaaaactacgaccttattatcagtgacattaaa
atgccgaggttggatgggtttggattgttggatcatgttaaggaacgatttgcaagtacg
gccatgattatgatcacggcattttcaaccgcggagcaggctgtcgatgccatgaaaaag
ggcgcgtacgattatataaccaaaccttttaaaaacgaagaaattcgtctggtggttgaa
aatgccctggagcgtatggatttgcgccgggaaaacctgcaactcaaaaaagaactgggc
cagcgtttctcctttgctaatattatcggcaaaagcaaagtcatgcagggggtttatgac
ctgattgaaaaggtatccgcgagtaaggtcaacgttcttattaccggagagagcggtacc
ggcaaggaattggtcgctcgcgcgattcactacaatagcgataggcacgatcggcctttt
gtagccatatattgcggggccattccagaaaacttattggagagtgaactttttggtcat
gaaaaaggcgcctttaccggtgcggtgcaacagaagcaaggcttgttcgaagtggcagac
ggggggactctgtttcttgatgaaatcgccgaattgcctcctatgatgcaggtgaaattg
ctgcgggttattcaggaacatgaatttcgcaaggttggcggcacccgggatctcaaagtc
gacgtacgcctggtggcggctaccaataaagacctggcgcaggcggtaaccgaagaccaa
tttcgagaagatctgtattaccggctcaacgttattcaggttggattgcccccattgcgg
gaccgccgggaagatattcctctgctggttagtcattttctgcaaaagttaacccccggt
tttagtacaacgattcctgacggcgtgatgcggcgatttctcgattatcactggccgggc
aatatacgcgaacttgaaaataccgtggagcgttgtgtcgttcttggcggcaagggagaa
atcaccgaggatagtctgccgccccatatgctttgtataagcgggacaggagatcagcaa
cttacggagttgccggaggaggggcttgatctcgatgattatttaggggctattgaaaag
gatatcctcctcaaggctctggatcggactggcggggtgcgcaagcgggccgccgaactt
ctccatatcaccttccgctccatacgctatcgtttggcaaaattcgggattgaggccgaa
ggtggggacgaacgatctgggctcgggtgtgacaaataa
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