Syntrophotalea carbinolica: Pcar_2369
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Entry
Pcar_2369 CDS
T00285
Name
(GenBank) RNA methyltransferase, TrmA family
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pca
Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pca03009
]
Pcar_2369
Enzymes [BR:
pca01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
Pcar_2369
Ribosome biogenesis [BR:
pca03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Pcar_2369
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_15
TRAM
Methyltransf_4
Methyltransf_11
TRM5-TYW2_MTfase
PabTrmU54_TRAM_dom
PrmA
Ubie_methyltran
PCMT
Motif
Other DBs
NCBI-ProteinID:
ABA89608
UniProt:
Q3A1Z9
LinkDB
All DBs
Position
2790232..2791701
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AA seq
489 aa
AA seq
DB search
MVPANLTIKPKQPENNPMPKQKQSRSKPARARRKPSAELIEVTIDQLNDDGIGIGRYQGK
EVLVAGSLPGEKVCVAVEHEGQRRIIGQFRRLLTKSPARKPSPCPSLRDCQGCSLMSMGY
ADQLDFKQTKVREALNAYPQLKGTDISPILAAEEPLGYRTSAKLAVARRNGRIVIGLYRR
GSHEVADIGACPLHHPLVNRIVEVVREEIARQDIYLYNPVTRRGLLRYLLIKVSPATGKA
MVTFVTAQREYKRITALAKWVARKIPEVVSVQQNVNASSGNVIMGRETLRMVGQPDLFDQ
VGNIRLRISPTSFFQVNHAQAARIYALVRRWAALESHEFALDLYCGIGGIALHLAQDAGR
VIGVEMVEDAVRNAQQNAAMNNLANCRFLAGDTAELLQDLIVDLPSLATAVLNPPRSGCD
VEVLQAVTQLQPRTIIYVSCNPDTLARDLAELQKLGYRTAEIQPVDMFPQTAHVESVARL
VKTGQQANQ
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggtgccggcaaacttaacaataaagcccaaacaaccggaaaacaacccaatgcctaaa
caaaaacaaagcagatcaaagcccgcgcgcgcgcgccgcaagccgtccgcagagcttata
gaagtcactatcgaccagcttaacgacgatggtatcggcatcggccgataccagggcaag
gaggtcctggtggccggatccctgcctggcgaaaaagtctgcgtcgctgttgaacatgag
ggacaacgccgtatcatcggccagtttcgccgcttgctgaccaagagtcccgcccgcaag
ccgtcaccgtgcccgagcctgcgcgactgccagggatgctccctgatgtccatgggctat
gccgaccaattggactttaagcagaccaaggtacgcgaggctctcaacgcctatccgcag
ctgaaagggacggatatttcgcccatccttgcggccgaagaacccctcggctatcgcacc
agcgccaagctggctgttgcgcgtcgtaacggccgcattgtcatcggcctgtaccggcgc
ggcagccatgaggttgccgatatcggcgcctgtccgttgcaccatcccctggtgaaccgc
atcgtcgaagtggtacgggaggaaatcgcacggcaggacatctacctctacaaccccgtt
acccgccgcgggctgctgcgttacctgctgatcaaagtcagccccgctaccggcaaggcc
atggtgacctttgtcacggcccaacgggaatacaaacgcatcacggcactggccaaatgg
gtcgcacgcaagattccggaagtcgtatcggtacagcagaacgtcaatgcctccagcggc
aatgtcatcatggggcgcgaaaccctgcgcatggtgggccagcccgatctattcgaccag
gtcggcaatattcggctgcgcatttcaccgacttccttcttccaggtcaatcatgcgcag
gcggcccgcatttatgctctggtacgtcgctgggcggcccttgaatcccatgagttcgcc
ctcgatctgtattgtggaatcggcggcatcgccctgcacctggcccaggacgccggacgg
gtcatcggcgtcgaaatggtcgaggacgccgtgcgcaacgcgcaacagaacgcggccatg
aacaatcttgccaactgccgttttctggccggcgacacggcagagctcctgcaggatctg
attgtggatttgccgtccctggcgacggcggtcctcaacccgccccgcagcggttgcgat
gtggaagttctgcaagccgtaacgcagctacaaccgcgcaccatcatctatgtttcctgc
aatcccgataccctggcccgcgacctcgcggagcttcagaaacttggctaccggacggct
gaaatccaacccgtggacatgtttccgcagactgcccatgtggaatcggtagcccgcctg
gtgaaaaccggccaacaggcaaaccagtga
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