Syntrophotalea carbinolica: Pcar_2420
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Entry
Pcar_2420 CDS
T00285
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca00300
Lysine biosynthesis
pca00470
D-Amino acid metabolism
pca01100
Metabolic pathways
pca01110
Biosynthesis of secondary metabolites
pca01120
Microbial metabolism in diverse environments
pca01230
Biosynthesis of amino acids
Module
pca_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pca_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Pcar_2420 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Pcar_2420 (lysA)
Enzymes [BR:
pca01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
Pcar_2420 (lysA)
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Ortholog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
ABA89659
UniProt:
Q3A1U8
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Position
2847352..2848605
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AA seq
417 aa
AA seq
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MNYFQYRDNDLFCEDVALKDIAAQVGTPFYVYSHATLSRHLEAFSSAFADVPHLICYSIK
ANSNLAVLKTFVSHNAGFDIVSGGELFRAQQVGCDPAKIVYSGVGKTEAEIADALQAGIL
MFNVESRQELDTINAVAGRLGKKAGIAIRVNPDVDPQTHPYISTGMKKAKFGINISQALD
DYRLAASLPNLEVIGVDCHIGSQLTKLSPFVDAIAKIRELVQTLQNEGFGIKYLDLGGGL
GITYEEEEPPSPADYAEVIIEGTKGLGVTLVFEPGRVMVGNAGMLVSKVLYVKEGEAKNF
VIVDAAMNDLTRPALYGSYQGIQAVDRSTSDTIVADVVGPICESGDFLAQDREITAFSQG
DLLAVASAGAYGFTMSSNYNSRRRVPEIMVKGDQVMVIRKRETYDDLIKGESIPEGL
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgaattactttcaataccgcgacaacgaccttttttgtgaagatgtcgcccttaaggat
atcgccgctcaggtcggcacgcccttctatgtttattcccatgcgaccctcagtcgccat
ctggaagcattttcctcggcctttgccgacgtgcctcacctgatctgttattccatcaag
gccaacagcaacctggcggtgctgaaaaccttcgtcagccacaatgccggcttcgacatc
gtctccggtggcgaactgttccgtgcccagcaagtcggttgcgatcccgccaaaatcgtc
tactccggcgtgggtaaaaccgaagcggaaatcgccgatgcgctgcaggcgggcatcctg
atgttcaatgtcgagtcgcgacaggagctcgataccatcaatgccgtggccggacggctc
ggcaaaaaagccggcatcgccatccgcgtcaaccccgacgtcgatccgcagacccacccc
tacatctccacgggtatgaaaaaggccaagttcggcatcaacatctcccaggccctggac
gattaccgccttgcggccagcctgccgaacctcgaggtcattggcgtggactgccacatc
ggcagccagttgaccaagctgtcgcccttcgtcgatgccatcgcaaaaattcgcgaactg
gtgcagaccctgcagaacgaaggtttcggcatcaaatacctcgatctgggcggcggcctc
ggcatcacctacgaggaagaagagccccccagccccgccgattatgccgaagtcatcatc
gaaggcaccaaaggcctgggcgttaccctggtttttgaaccgggccgcgtcatggtcggc
aatgccggcatgctggtttccaaagtcctgtatgtcaaagaaggcgaagccaaaaacttc
gtgatcgtcgatgccgccatgaatgatctcacccgcccggcgctgtatggctcgtaccag
ggcattcaggcggtggatcgttccacttccgacaccatcgtcgccgacgtggtcggcccg
atctgcgaatcgggagactttctcgcccaggatcgggagatcaccgcattttcccagggc
gacttgctggcggtcgcttcggctggagcctacggctttaccatgagttcgaattacaac
agccgccggcgggtaccggagatcatggtgaaaggtgaccaggtcatggtcatccgcaaa
cgtgaaacctacgacgacctgatcaaaggcgaaagcatcccggaaggactgtaa
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