Syntrophotalea carbinolica: Pcar_2613
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Entry
Pcar_2613 CDS
T00285
Name
(GenBank) 3'-to-5' exonuclease, putative
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca03030
DNA replication
pca03430
Mismatch repair
pca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Pcar_2613
03430 Mismatch repair
Pcar_2613
03440 Homologous recombination
Pcar_2613
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pca03032
]
Pcar_2613
03400 DNA repair and recombination proteins [BR:
pca03400
]
Pcar_2613
Enzymes [BR:
pca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Pcar_2613
DNA replication proteins [BR:
pca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Pcar_2613
DNA repair and recombination proteins [BR:
pca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Pcar_2613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ABA89851
UniProt:
Q3A1A6
LinkDB
All DBs
Position
complement(3065004..3065672)
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AA seq
222 aa
AA seq
DB search
MSLENIQQQVAGCDTREGVVVLDFETSGMSPVQGDRAIEIGAVRIVGGQIADRFQSLMNP
GCRISSFIESFTGISNAMVQAAPPATQVMAAFHDFIGDAPLVAHNASFDRRFLDAELQRI
DRCRRQEFACSLLVARRVYPDSPNHKLATLVSYKGLPTDGCFHRALADAEMTAHLWLRMA
ADLQDAYGFSQVPFALMSALARQKKNRVAAFLRERALEMRGM
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
ttgtctttagaaaatatacagcagcaggtggctgggtgtgatactcgcgagggcgtcgtg
gtgctcgatttcgagaccagcggcatgtcgcccgtgcagggtgaccgggccatcgaaatc
ggcgctgtgcgcatcgtgggtgggcaaatcgccgaccggtttcagagcttgatgaacccg
ggatgtcggatcagtagctttatcgagagttttaccggcatcagtaacgccatggtgcag
gccgccccgcccgccacgcaggtcatggcagcttttcacgattttatcggtgatgcgccg
ctggtcgcgcacaatgcgtcttttgaccggcgtttcctcgatgccgaactgcagcgtatc
gaccgttgccggcggcaggagttcgcctgttctctgctggtggctcgccgtgtctacccc
gattcgcccaaccataagctggctaccctggtgtcctataaggggctgcctaccgacggt
tgttttcaccgggcgctggccgatgcggaaatgaccgctcatctgtggctgcgcatggcg
gcggaccttcaggatgcctacggtttttcccaggtgccgtttgccttgatgagcgcattg
gcaagacagaaaaaaaatcgggtggctgcgtttttgcgggaacgggcgctggagatgcgg
ggaatgtaa
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