Syntrophotalea carbinolica: Pcar_2672
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Entry
Pcar_2672 CDS
T00285
Name
(GenBank) RNA-binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
pca
Syntrophotalea carbinolica
Pathway
pca03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Pcar_2672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pca03011
]
Pcar_2672
Ribosome [BR:
pca03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Pcar_2672
Bacteria
Pcar_2672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
S1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
ABA89908
UniProt:
Q3A149
LinkDB
All DBs
Position
complement(3123315..3124514)
Genome browser
AA seq
399 aa
AA seq
DB search
MVEDKHDFEESNEEENFADMLEQSLAGIQPLAPGQQVEATVLQIGDQWIFLDVGQKGEGV
LDRRELADEEGQLNVAQGDRIKVFFLSRAGGELRFTTRLASGSAGAAQIEEAWRSGIPVD
GRLEKEVKGGFEVRLAGGVRAFCPFSQLGLRRDDSSETAIGENRSFKVIQFGEQGRNVVV
SHRAILEEERARQRETLRETLQEGMVVKGTVTSLRDFGAFIDIGGLEGLLPISEISYGRV
ENIEDVLHVGQELELAIKKLDWQADRFSFSLRDTQADPWSKVGTLYMEGSTHTGTVARLA
NFGAFVTLEEGVDGLIHISKLGGGRRINHPREVLEVGQQLLVTIEQVDREQHRISLAPAA
DGAESAAPTRYVEKDTSGSMGTFADLLKGKFEKKGKKRK
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atggttgaggacaagcacgatttcgaagagagcaacgaagaggaaaactttgccgatatg
ctggagcagagtctggccggtatccaacctttggcgccggggcaacaggtggaagcgacg
gttctgcagattggcgaccagtggatttttctggatgtaggtcagaagggcgagggggtg
ctcgatagacgcgagctggctgacgaagaggggcaactcaacgtcgcccagggggatcgc
atcaaggtatttttcctctcccgggccggtggtgaacttcgctttaccacgcgtctggcc
agcggttcggccggtgcggcccagatcgaagaagcctggcgcagcggtatcccggtggat
ggacgcctggaaaaagaggtcaagggaggtttcgaagtgcgcctggcgggcggtgtgcgg
gccttctgtccgttttcccagctcggattgcgccgtgatgacagctccgagacggctatc
ggtgaaaatcgctctttcaaggtgattcagttcggagagcagggccgcaacgtggtggtt
tcgcaccgggcgattctcgaggaggagcgtgcccgtcagcgcgaaacgttgcgtgaaacc
ctgcaagagggcatggtggtcaagggcaccgttacatcgctgcgggatttcggcgcattt
atcgatatcggtggcctcgaaggactgctgccgatctccgagatcagctatggccgcgtg
gaaaatatcgaagatgtgctgcatgtcggccaggagctggagctggctatcaaaaagctg
gactggcaggccgatcgtttttcattcagcctgcgcgatacccaggccgatccctggagc
aaagtcgggaccctttatatggaaggctccacccataccggaacggtcgcacggctggcc
aatttcggtgccttcgtgaccctggaagaaggtgtggacggactgatccatatctccaaa
ctgggcggcgggcgtcgtatcaaccatcctcgcgaagtgctggaagtcggccagcaattg
ctggtgaccatcgagcaggtcgatcgcgagcaacaccgcatctctctggcgccggccgcg
gacggagccgaaagtgccgcaccgacccggtatgtcgaaaaagatacaagcggttccatg
ggaacttttgcggatctgctcaaggggaaattcgaaaagaagggtaagaagcgtaaatag
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integrated database retrieval system