KEGG   Syntrophotalea carbinolica: Pcar_2815
Entry
Pcar_2815         CDS       T00285                                 
Symbol
tssC
Name
(GenBank) type VI secretion system needle sheath protein TssC
  KO
K11900  type VI secretion system protein ImpC
Organism
pca  Syntrophotalea carbinolica
Brite
KEGG Orthology (KO) [BR:pca00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pca02044]
    Pcar_2815 (tssC)
Secretion system [BR:pca02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pcar_2815 (tssC)
SSDB
Motif
Pfam: VipB VipB_2
Other DBs
NCBI-ProteinID: ABA90050
UniProt: Q3A0Q7
LinkDB
Position
3284548..3286089
AA seq 513 aa
MNMQNTAPSKSKPQEEVLLDNENSYERLCELVDIAPLNESIKLNSFADASRMADISLQER
LTAGIQVFLDLATRNNSQIERIDKTLLDQYIAQIDQTIGNQLDVILHHLDFQKMESAWRG
LQFMVDRCDFRCNTKVEILDCSKEDLLEDFEEAPEIIQTGLYKHVYVSEYDTPGGQPFSN
IVANFEFDSSAQDVTLLREASKVSASAHCPFLASVGSKFFGKSSVEEIAKINDLSNYMEK
AEFTRWRSFRETEDSRYVGLLTPRFLLRLPYGQDTIPVRTFNYEENVSAEDHRSYLFGNP
VFAFAGNIAQSFAKHGWAVNIRGPEAGGKVENLPVHLHDSGKGMQIKMPTEMLVSETREL
EMANLGFIPLSYYKNSDFACFFSANSVQKPSEYANTEANANSMINARLPYIFLVSRLAHY
LKVLQRENIGSSKSRQKLENELNAWIQTLVTKMKDPEPELIATHPLRDGQVTVREIPENP
GYYSVDLFVRPHFQIEGVDVQLKLVAQMPRDNK
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgaacatgcagaatacggcaccgagcaaaagcaaacctcaagaagaagtccttcttgac
aacgagaactcctacgaacgtttatgcgagctggtcgacatcgctcccctgaacgaatcg
atcaaactgaacagctttgccgacgcgtcccgaatggcggatatttccctgcaggaacgg
ctgacggccggcatccaggtgtttctcgacctggcaacccggaacaattcccagatcgaa
cggatcgacaaaaccctgctcgaccagtacatcgcccagatcgatcagaccatcggcaat
caactggatgtcattcttcaccacctggattttcagaagatggagagtgcctggcgcggc
cttcaattcatggtcgaccgctgtgacttccgctgcaacaccaaagtggaaatcctcgac
tgctccaaggaggatctgctggaggacttcgaggaagcccccgaaatcatccagaccggt
ctctacaagcatgtctatgtcagcgaatacgacacgcccggcggtcagcccttttccaac
attgtcgcgaacttcgaattcgacagctcggcccaggacgtcaccctgctgcgcgaagcc
tccaaggtttcggccagtgcccactgccccttcctggcgtcggtcggttcgaaatttttc
ggcaaatccagcgtcgaggaaatcgccaagatcaacgacctgtccaactacatggaaaag
gccgagttcacccgctggagaagcttccgcgaaacggaagacagccgctacgtgggtctg
ctgactccccgattcctgctgcgcctgccctacggccaggacaccattccggtccgcacc
ttcaattatgaagaaaacgtcagcgccgaggaccaccgcagctatctgttcggcaacccg
gtcttcgccttcgccggcaacatcgcccagagcttcgccaaacacggctgggccgtcaac
atccgcggtccggaagccggagggaaagttgaaaatctgccggtgcacctgcacgacagc
gggaagggcatgcagatcaagatgcccacggaaatgctggtttccgaaacccgcgaactg
gaaatggccaacctcggcttcatccccctgagctattacaaaaacagcgacttcgcctgc
tttttctccgccaactcggtgcagaaaccgagcgagtacgccaacaccgaggccaacgcc
aacagcatgatcaacgcgcggctgccctacatcttcctggtgtcgcggctcgctcattat
ctcaaggtcctgcagcgggaaaacatcggctcgtccaagagccgccagaaactggaaaac
gaactgaacgcctggatccagaccctggtgacgaaaatgaaggaccccgagccggaactg
atcgccacccaccccctgcgggacggccaggtaacggtgcgggaaatcccggaaaacccg
ggctactacagcgtcgacctgtttgtccggccgcatttccagatcgagggggtggacgtg
cagttgaaactcgtggcgcagatgccgcgggataataaataa

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