KEGG   Syntrophotalea carbinolica: Pcar_2820
Entry
Pcar_2820         CDS       T00285                                 
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH, putative chaperone
  KO
K11907  type VI secretion system protein VasG
Organism
pca  Syntrophotalea carbinolica
Pathway
pca03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pca00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    Pcar_2820 (tssH)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pca02044]
    Pcar_2820 (tssH)
Secretion system [BR:pca02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   Pcar_2820 (tssH)
SSDB
Motif
Pfam: AAA_2 AAA_lid_9 AAA AAA_5 ClpB_D2-small AAA_16 AAA_22 nSTAND3 Sigma54_activat AAA_7 Zeta_toxin bpMoxR NACHT AAA_25 IstB_IS21 AAA_18 AAA_14 T2SSE DUF815 NBD_SMAX1 AAA_24 RuvB_N TIP49 DUF3584 DUF4763 AAA_6 Torsin TMF_TATA_bd ABC_tran_CTD
Other DBs
NCBI-ProteinID: ABA90055
UniProt: Q3A0Q2
LinkDB
Position
3290118..3292817
AA seq 899 aa
MSTAQIKALLDKLNEHCLQALESAAAFAGMRGHFEVCIEHLVVKLLEKGEGDFDLILRHF
DVNLDRLWQAMLDNLSRLRSGNRNKPSFSLQLLEWFERAWTISSLRDPQAQLRSGALLEA
LLDLAPRLPGTAWLSLEVVSRNLLQSHLAELIRFSVENPQLPSAAEAVVPSPATASVRSA
DTATPHLDAYTTDFTARAAKGAIDPVLGRNDEIRQIIDILTRRRKNNPILVGEPGVGKTA
VVEGLALRIAENGVPDSLKKVRLVGLDLGLLQAGAGVKGEFEKRLKSVIEEIISSPTPII
LFIDEAHTLIGAGGDAGQGDAANLLKPALARGELRTLAATTWSEYKKYFERDAALERRFQ
MVKVEEPSQDNAIVMLNGLKGHYQKHHGVLITDSAVEAAVSLSSRYINGRYLPDKAIDLL
DTAAARICMGKAATPAEVDTAREHLTYIERRRKHLAEETAQGIPADVNLLADLQQQEEEA
RKQLTELEQRWQAERALVGRIQESRTGGKDALADLATLQRDLQELQKNSPLVQPEVDADT
IARVVADWTGVPVGRMVKNDLANLLDFENTLSRRIIGQESAIHAIGQSIRCSKAGLRENQ
APIGVFLLTGPSGVGKTETARAIADTLYGGERFMVTINMSEYQEAHSVSQLKGSPPGYVG
YGEGGILTEAVRQRPYSVILLDEVEKAHPDVLNMFYQVFDRGFMRDGEGREIDFKNTVLI
MTSNLGAETILDLCAPPEPVGEEEEPETPFAPPSHGALIEAARPALTAHFPAALLARMQI
VPLRPLDRDTLRQIIAQKLDKVAQRLFDAHGIRMRCTPEVIDHLVGRCHTPESGARAVNT
LIEQNLLPGISRSLLGFMVNEDMPQLMALEVGENGELECLFSDIVKEDEPQFAQAGAGG
NT seq 2700 nt   +upstreamnt  +downstreamnt
atgagcaccgcacagatcaaagctctgctggacaaactgaacgaacactgcctgcaagcc
ctggaatcggccgccgcctttgccgggatgcgtggtcattttgaagtctgtatcgagcac
ctggtggtcaagctgctggagaagggcgaaggggacttcgacctgatcctgcgccatttc
gacgtcaacctggaccggctctggcaggccatgctggacaacctcagccgcctgcggtcc
ggcaatcgcaacaagccgtctttttcactccagcttctggagtggttcgaacgggcctgg
acgatcagttccctgcgcgacccccaggcccaactgcgctcgggtgctctgctcgaagcc
ctgctggacctggcgccgcgacttcccggcacggcttggctgtccctggaagtcgtatcc
cgcaatctgctgcagtcccacctggccgaactgatccggttttcggtggaaaaccctcaa
ctacccagtgcagccgaagccgtagtgccatctccggcgacggcgtcggtccgttctgcc
gacaccgctactccgcacctggacgcctacaccaccgacttcacggcccgggccgccaag
ggtgccatcgatccggtcctggggcgcaacgacgagattcgtcagatcatcgacatcctg
acccgccgccgcaagaacaatccgatcctggtcggcgaacccggcgtcggcaagacggcc
gtggtggaaggcctggccctgcggattgccgaaaacggggtgccggacagcctgaaaaag
gtccgtctggtcgggctggatctgggcctgctgcaagccggagccggggtcaagggagaa
ttcgaaaaacgcctgaaatcggtgatcgaagagataatctcctcgccgactccgatcatt
ctgtttatcgacgaggcccacaccctgatcggggccggcggcgacgccggccagggcgat
gccgccaatctgttaaaaccggcccttgcccggggagagctgcgcaccctggccgccacc
acctggagcgaatacaaaaagtatttcgagcgggacgcggccctggagcgccgttttcag
atggtcaaggtggaggaaccctcgcaggacaacgccatcgtcatgctcaacggcctcaag
ggccattaccagaaacatcacggggtactgatcaccgatagcgcggtggaggccgcggtg
agcctgtcgagccgctacatcaatggtcgctacctccccgacaaggccatcgacctgctc
gataccgccgccgcccggatctgcatgggcaaggccgccactccggcagaggtggatacc
gcccgcgagcatctgacctatatcgaaaggcgccgcaaacacctggccgaggaaaccgcc
cagggtatccccgccgacgtcaacctgctggccgacctgcaacaacaggaagaggaggcc
cgcaagcaattgaccgaactggagcaacgctggcaagcggaacgagccctggtcggccgg
attcaggaatcccgtaccggcggcaaggacgccctcgccgatctggcaaccctgcaacgg
gacctgcaggaattacagaaaaactctcctctggtccagcccgaagtcgacgccgacacc
atcgcccgggtggtggccgactggaccggcgttcccgtgggccggatggtaaaaaacgac
ctggccaacctgctcgatttcgaaaataccctgagccggcgcatcatcggccaggagtcc
gccatccacgccatcggccagtcgattcgctgcagcaaggcgggcctgcgggaaaaccaa
gcccccatcggcgtgttcctgctcaccggccccagcggggtgggcaaaaccgaaaccgcc
cgggccatcgccgacaccctgtacggcggggaacggttcatggtgaccatcaacatgagc
gaataccaggaggcccattcggtttcgcaattgaaaggctcgccgcctggctatgtcggc
tacggcgagggcggcattctgaccgaagcggtgcgccagaggccctattcggtgatcctg
ctcgacgaggtagaaaaggcccatcccgacgtactcaacatgttttaccaggtcttcgat
cggggcttcatgcgcgacggcgaaggacgggaaatcgatttcaagaacaccgtgctcatc
atgaccagcaatctgggcgccgaaacgattctggatctgtgcgctcctccggaaccggtc
ggcgaagaggaggagcccgaaacgcccttcgccccaccatcccacggggccttgatcgag
gcggcccgccccgccctgacggctcatttcccagcggcgctgctggcccgcatgcagatc
gtgcccctgcgtcccctggatcgggacaccctgcggcagatcatcgcccagaaactcgac
aaggtcgcccagcggctgttcgacgcccacggcatccgcatgcgctgcaccccggaggtc
atcgaccatctcgtcggccgctgccatacccccgaatcgggagcccgcgccgtcaacacc
ctgatcgagcaaaacctgttgcccggcatctcccgcagcctgctcggcttcatggtcaac
gaggacatgccgcagctcatggctctcgaggttggcgaaaacggtgaacttgagtgcctt
ttcagcgacatagtgaaggaggacgaaccccaattcgcccaggcgggggcaggtggataa

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