Syntrophotalea carbinolica: Pcar_2914
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Entry
Pcar_2914 CDS
T00285
Name
(GenBank) helicase, putative
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pca
Syntrophotalea carbinolica
Pathway
pca03420
Nucleotide excision repair
pca03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Pcar_2914
03430 Mismatch repair
Pcar_2914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pca03400
]
Pcar_2914
Enzymes [BR:
pca01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Pcar_2914
DNA repair and recombination proteins [BR:
pca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Pcar_2914
MMR (mismatch excision repair)
Other MMR factors
Pcar_2914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_22
HHH_6
NPHP3_N
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ABA90149
UniProt:
Q3A0F8
LinkDB
All DBs
Position
complement(3401690..3403666)
Genome browser
AA seq
658 aa
AA seq
DB search
MMPQTFTLQEEQRLSEVCNAVDSFQADRKKQLTDHDRKIRDLEVERLESVDPREKDRLTA
EIRRLSQYDPAKYLVPFEQGQSPYLAGVVIHDEDPRIGQKHLLFGKQSLMAGSQVIVVDW
RKAEISKLYYDWEEGEEYEDDIGGRERFGMIEKKISYGIRRRELLTIQTGAGTLKKTDEG
WVEQGRQNASAVRKESVGDHRMVDIVSLISREQFGLITKQHGGCLYLTGGAGCGKTTVAL
HRLSFLLFNQPELFRPQRCLVVMFNRSLCDYIRQTSTDLLTNRLPVDTFHSWSAKALRSF
GVAAKFSACQGQGLGSLKKQAGMYHALVEYVRVTKAQDDPFADLEAFYNRTDLLARHLSD
RRQIERLAHSGAKLSGAQTQELSFDDSGILLHLLQLRCQVEDVYQEAYGWYDHILIDEAQ
DLSLIELKALTLATTKHRSLTVCADEKQKILDFVDSKGISAFQMDLKNQGLSSGELCVSY
RSTAQIMALASRVSGRPVTEVVNEGPDPRFHKWDTQEESLAHLKRSLRVLLEREPKSLTA
IICRYKGEAQSVYAAMKGISGVRLQTGSLSFEPGVLITNAHQVKGLEFGGVILWNPTRKA
YPDTEIGKNLLYVVITRASNRLAIYHHEPLTGLLCNRSVEDVGICRKAVGDCGNKDPD
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgatgccccaaacatttaccctgcaggaagaacaacgtctttcggaggtctgtaatgcc
gtcgacagttttcaagccgaccgcaagaagcaactgaccgatcacgaccgcaagataagg
gatcttgaggttgaacgcctggaatcggtcgatccgcgggaaaaggatcgtctgacggcc
gaaatccgccggttgtcacagtatgaccctgcaaagtatctggttccctttgagcagggc
cagtctccctatcttgccggggtggtcattcatgatgaagatccgcgcattggccaaaag
cacctgctattcggcaagcaaagtctcatggccggatcgcaggttatcgttgtcgattgg
cgcaaggccgagatatccaagctctattacgattgggaagagggggaggagtacgaggac
gatatcggcggaagagaacgcttcggaatgatcgaaaagaagatttcctacggcattcga
aggcgcgaattactgaccatccagaccggcgcaggcactctgaagaagaccgatgagggc
tgggtggagcagggcaggcaaaacgccagtgccgtccggaaagagtctgtgggtgaccac
cggatggtggatatcgtttccctgatctcccgggagcagttcggcctgattacaaaacag
cacggtggctgtctgtatttaaccggtggcgccgggtgcggcaaaacgacggtagcgctg
cacagactgtcgtttctgttattcaaccagccggagctgtttcggccgcaacgctgcctg
gtggtcatgtttaaccgatccttgtgtgattacatccgtcagacctcgaccgatctgctg
accaaccgattgccggtggatacctttcattcctggtcggcaaaggccttgcgttccttc
ggcgtggccgccaagttttcggcctgccaggggcaagggttgggatcgctgaaaaagcag
gccgggatgtatcatgctttggtcgaatatgtgcgtgttacgaaggcccaggatgaccct
tttgccgacctggaagcgttttataaccggaccgacctgctggccagacacctttcagat
cggcggcagatagagcgcctggcgcacagcggtgcgaaactttccggggcgcagactcag
gaactctcgtttgacgatagcgggatcctgctgcatcttctccagcttcggtgccaagtg
gaggatgtttatcaggaagcttacggatggtatgaccatattctgatcgacgaggcgcag
gatctttcgctgatcgaattaaaagccctcactctggccaccactaaacacagaagtctg
acggtgtgtgcggatgaaaaacaaaagattctcgattttgtggactccaaaggcatttcc
gcctttcaaatggatctgaaaaatcagggtttatcgtcaggcgagctctgcgtaagttat
cgttcgacggcccaaatcatggccttggcctcacgtgtgtcgggccgtccggtcaccgaa
gtggtcaacgaaggccccgatcctcgttttcacaagtgggatacgcaagaagagtcgtta
gcacaccttaaacgttcgttgagggttttgcttgagagggaacccaagagcctgacagcc
attatctgtcgctataaaggcgaggcacagtctgtctacgctgccatgaagggtatttcc
ggagtgcggctgcagaccggttcgctgtccttcgagcccggtgttcttatcaccaacgcc
catcaggtaaaaggattggaatttggcggtgtgattctatggaatcctacaaggaaggca
tatccggatacggagattggcaaaaacttgctgtatgtcgtcatcacccgcgccagcaac
cggttggcgatttatcaccatgaaccccttaccggattactgtgcaacaggtctgtggaa
gatgttggaatatgtcggaaggcggtaggggattgcgggaacaaggatccggattga
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