Pseudomonas canadensis: V6L78_00925
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Entry
V6L78_00925 CDS
T10710
Symbol
thiC
Name
(GenBank) phosphomethylpyrimidine synthase ThiC
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00730
Thiamine metabolism
pcaa01100
Metabolic pathways
pcaa01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
V6L78_00925 (thiC)
Enzymes [BR:
pcaa01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
V6L78_00925 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
WWL84493
LinkDB
All DBs
Position
complement(210237..212126)
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AA seq
629 aa
AA seq
DB search
MSTRPKNTVHLSESAKVDSGSVQPFTRSQKIYVQGTRPDIRVPMREISLDVTPTDFGGEI
NAPVVVYDTSGPYTDPNVIIDVRKGLGDVRSPWIEVRNDTERLPGLSSHFGQQRLSDAEL
TALRFAHVKNPRRAKAGANVTQMHYARKGIITAEMEYVAIRENMKLEEARATGLLDQQHA
GHSFGASVPKIITPEFVREEIARGRAIIPANINHTELEPMIIGRNFLVKINGNIGNSALG
SSIEEEVAKLTWGIRWGSDTVMDLSTGKHIHETREWIIRNSPVPIGTVPIYQALEKVGGA
AEDLTWELFRDTLIEQAEQGVDYFTIHAGVLLRYVPLTAKRVTGIVSRGGSIMAKWCLAH
HKENFTYTHFDEICEIMKAYDVSFSLGDGLRPGSIADANDAAQFGELETLGELTKTAWKH
DVQTMIEGPGHVPMQLIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIG
WFGCAMLCYVTPKEHLGLPNKDDVKTGIITYKIAAHAADLAKGHPGAQIRDNALSKARFE
FRWEDQFNLGLDPDTARSYHDETLPKDSAKVAHFCSMCGPKFCSMKITQEVREYAANQRI
EAVDVDVAKGLAEQAERFKQEGSQLYKKV
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgagtacaagaccaaaaaataccgtgcacctgagtgagtcggccaaagtcgactccggc
tccgtgcaaccctttacccgctcgcaaaaaatctacgtacaaggcacccgcccggacatt
cgtgtgccgatgcgcgaaatcagcctggacgtgacccccaccgacttcggcggtgaaatc
aacgcgccggtcgtggtttatgacacctccggcccgtacaccgaccctaacgtcatcatc
gacgtgcgcaaaggccttggcgatgtgcgctcgccgtggatcgaagtgcgtaacgacacc
gagcgcttgccaggcctcagctcccacttcggccagcagcgcttgagcgatgccgaactc
accgcgctgcgcttcgcccatgtgaagaacccgcgtcgtgccaaggccggcgccaacgtc
acgcagatgcactacgcgcgcaaaggcatcatcaccgccgagatggaatacgtcgccatc
cgtgaaaacatgaagctggaagaagcccgtgccactggcctgctcgaccagcaacacgcc
ggccacagctttggcgccagcgtgccgaagatcatcacgcctgaattcgtgcgcgaagaa
atcgcccgtggccgcgcgatcatcccggccaacatcaaccataccgaactggaaccgatg
atcatcggccgtaacttcctggtgaagatcaacggcaacatcggcaacagcgcactgggt
tcgtccatcgaagaagaagtggcgaaactgacctggggcattcgctggggttcggacacc
gtgatggacttgtccaccggcaagcacatccacgaaacccgtgagtggatcatccgcaac
tcgcccgtgccgatcggcaccgtgccgatctaccaggccctggaaaaagtcggcggcgcc
gccgaggacctgacttgggagttgttccgcgacaccctgatcgaacaggccgagcagggt
gtggattacttcaccattcatgccggcgtgctgctgcgctacgtgccgctgaccgccaaa
cgcgtgaccggcatcgtgtcccgtggcggttcgatcatggccaagtggtgcctggcgcac
cacaaagagaacttcacctacacgcatttcgacgaaatctgcgaaatcatgaaggcctat
gacgtcagcttctccctcggcgacggcctgcgccctggctcgattgccgacgccaacgac
gccgcgcagttcggcgagctggaaaccctcggcgagctgaccaagactgcctggaagcac
gacgtgcaaaccatgatcgaaggccctggccacgtgccgatgcagttgatcaaagagaac
atggacaagcagctcgagtgctgcgacgaagcgccgttctacaccctcggcccgctgacc
accgacattgcgccgggctatgaccacatcacttccggcatcggcgcggcgatgatcggc
tggttcggttgcgccatgctctgctacgtcacgcccaaggaacacttgggcctgccgaac
aaggatgacgtgaagaccgggatcatcacctacaagatcgccgcccacgcggctgacctt
gccaaaggccatccgggcgcgcagatccgcgataacgccttgagcaaggcgcgcttcgaa
ttccgttgggaagaccagttcaacctcggcctggacccggacacggcgcgttcgtaccac
gatgaaaccctgccgaaggactcggccaaggtcgcgcatttctgctcgatgtgcgggccg
aagttctgctcgatgaagatcacccaggaggtgcgtgaatacgcggccaaccagcgcatt
gaagcggtggacgtggatgtggccaagggcttggcggagcaggcggagcggttcaagcag
gaaggcagtcagctgtacaaaaaggtctga
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