Pseudomonas canadensis: V6L78_01520
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Entry
V6L78_01520 CDS
T10710
Name
(GenBank) choline ABC transporter substrate-binding protein
KO
K02002
glycine betaine/proline transport system substrate-binding protein
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
V6L78_01520
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pcaa02000
]
V6L78_01520
Transporters [BR:
pcaa02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Glycine betaine/proline transporter
V6L78_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OpuAC
Motif
Other DBs
NCBI-ProteinID:
WWL84610
LinkDB
All DBs
Position
complement(356025..356960)
Genome browser
AA seq
311 aa
AA seq
DB search
MKKLLLTLTGAALLSANAMAAEPASCKNIRMGVVSWTDVVATSGMADVLLNGLGYDSKQT
SAVQQIIFAGIRDKRLDIFLGYWKPAMDNNIAPFLAAKQVKVFDTPSLADAQATLAVPQY
VADAGLKTFADIARFKDKLGGKIYGIEPGSGANTDIQKMIDTNHFGLGGFKLVASGEAGM
LAAVQRAVNRKEFVVFVGWTPHPMNINMKMAYLTGSEDVFGPDEGRATVSTVTAPDFAER
CPNANRLLENLTFTAAQESQLMVPIMERKSPQDVAKQWLRDHPEDLQRWLAGVTAFDGQD
GVAAVQASLKP
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaactgttgttgaccctcaccggcgccgcgttgctcagcgccaacgccatggcc
gctgagccggcctcctgcaagaacatccgcatgggcgtggtcagttggactgacgtggtc
gccacctccggtatggccgacgtgttgctcaacggcctcggctacgacagcaaacagacc
agcgccgtccagcagatcatctttgccggcatccgcgacaagcgcctggatattttcctc
ggttactggaagccggcgatggacaacaatatcgcgccgttcctggcggccaagcaggtc
aaggtgttcgatacgcccagtctcgcggacgcccaggccaccctggccgttccgcaatac
gtggccgacgcgggcttgaagactttcgccgacatcgcccgcttcaaggacaaactgggc
ggcaagatctatgggatcgagccaggcagcggcgccaacaccgatatccagaaaatgatc
gacaccaaccacttcggcctcggcggcttcaagctggtggcctccggtgaagccggaatg
ctggcagcggtgcagcgggcggtgaatcgcaaggagtttgttgtgttcgtcggttggacc
ccgcacccgatgaacatcaatatgaagatggcgtacctcaccggcagtgaagacgtgttc
ggccccgacgaaggccgcgccaccgtctccaccgtcaccgcgccggattttgccgagcgc
tgccccaacgccaatcgcctgttggaaaacctcaccttcaccgccgcccaggaaagtcag
ttgatggtgccgatcatggagcgaaagtcgccgcaggatgtggccaagcaatggttgcgt
gaccatcccgaggatttgcagcgctggctggctggggtgaccgcgtttgatggccaagat
ggcgtggctgcggtacaggccagcctcaagccctga
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