Pseudomonas canadensis: V6L78_01985
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Entry
V6L78_01985 CDS
T10710
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa00521
Streptomycin biosynthesis
pcaa00523
Polyketide sugar unit biosynthesis
pcaa00525
Acarbose and validamycin biosynthesis
pcaa00541
Biosynthesis of various nucleotide sugars
pcaa01100
Metabolic pathways
pcaa01110
Biosynthesis of secondary metabolites
pcaa01250
Biosynthesis of nucleotide sugars
Module
pcaa_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
V6L78_01985 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
V6L78_01985 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
V6L78_01985 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
V6L78_01985 (rfbB)
00525 Acarbose and validamycin biosynthesis
V6L78_01985 (rfbB)
Enzymes [BR:
pcaa01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
V6L78_01985 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
KR
NAD_binding_10
WW_USP8
Sacchrp_dh_NADP
NmrA
Motif
Other DBs
NCBI-ProteinID:
WWL84695
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All DBs
Position
459320..460402
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AA seq
360 aa
AA seq
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MRILITGGAGFIGSALIRHLIQHTEHEVLNLDKLTYAGNLESLTSIASNSRYEFVQADII
DQATVSAVLERFEPQAIMHLAAESHVDRSIDGPSDFIQTNIVGTYSLLEAARAYWQKLAE
PAKGSFRFHHISTDEVYGDLHGVDDLFTETTPYAPSSPYSASKAASDHLVRAWQRTYGLP
VLLTNCSNNYGPFHFPEKLIPLVILNALAGKPLPVYGDGLQVRDWLFVEDHARALLKVVT
EGVVGETYNIGGHNEQKNIDVVRGICQLLEELAPQRPSGVEKFADLITFVKDRPGHDQRY
AIDASKIERELGWVPEETFETGLRKTVQWYLDNLEWCRRVQDGSYQGERLGNTDFKDLIA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattctcatcaccggtggtgccggttttattggctctgccctgatccgacacctg
attcaacacactgagcacgaagtcctcaacctggacaaactcacctatgcgggcaatctg
gagtcgctgaccagcatcgcgtccaacagccgttatgagtttgtccaggccgatatcatc
gatcaggccactgtcagcgctgtactggagcgcttcgagccccaggcgatcatgcacctg
gcggcagagtcccatgtggaccgctcgattgatggcccctcggacttcattcaaaccaat
atcgtcggcacctacagcctgctggaagccgctcgcgcctactggcagaaactggccgag
cccgccaaaggcagcttccgttttcatcacatttccactgacgaagtgtacggtgacctg
cacggtgtggatgacctgttcaccgaaaccacgccctatgcgcccagctcgccgtactct
gcgagcaaggccgcatccgaccacctggtacgcgcatggcaacgcacctatggcctgccg
gtgctgcttacgaactgttcgaacaactatgggccgttccattttcccgagaagctgatc
cccctggtgatcctcaacgcactcgcgggcaagccattgccggtctatggtgatggctta
caagtacgtgactggctgttcgtcgaggaccatgcccgcgcgctgctgaaagtggtaacc
gagggtgtcgtcggcgaaacctataatatcggcggccacaatgagcaaaaaaacatcgat
gtcgtgcgtggcatctgccaattgctggaagagttggcaccccaacgccccagcggcgtc
gaaaaattcgccgacctgatcacgttcgtcaaagaccgccccggccacgatcagcgttat
gcaatcgacgccagcaagattgaacgtgagctaggctgggttcctgaagaaaccttcgaa
accggtttgcgcaaaaccgtgcagtggtatctcgataacctggaatggtgccgtagggtc
caggatggcagctatcagggcgaacgtttgggcaacaccgactttaaggatttgatcgca
tga
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