Pseudomonas canadensis: V6L78_02845
Help
Entry
V6L78_02845 CDS
T10710
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
V6L78_02845 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pcaa02022
]
V6L78_02845 (algB)
Two-component system [BR:
pcaa02022
]
NtrC family
KinB-AlgB (alginate production)
V6L78_02845 (algB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA
Mg_chelatase
VpsR
cREC_REC
AAA_22
AAA_2
AAA_19
MCM
AAA_16
HTH_23
Xre-like-HTH
HTH_29
nSTAND3
DUF815
Motif
Other DBs
NCBI-ProteinID:
WWL84857
LinkDB
All DBs
Position
655206..656552
Genome browser
AA seq
448 aa
AA seq
DB search
MESAKELQGRILLVDDESAILRTFRYCLEDEGYTVATANSAAQADALMQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAVDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRQPKDGLDSHSPAMMVVLETARQVAGTDANILILGESGTG
KGELARAIHGWSKRSKKSCVTINCPSLTAELMESELFGHSRGAFTGASESTLGRVNQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEDMVRDGRF
REDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVKEYARPARGFSDEAREALLNYRW
PGNIRELRNVVERASIICPQEKVEITHLGMAEQPGNNAPRIGAALSLDQLEKAHIGAVLA
TSDTLDQAARTLGIDASTLYRKRKQYNL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagccaaggaacttcaaggccgcattcttttagtggatgacgaatccgcgatc
ctccgcaccttccgttattgcctggaagatgagggctacaccgtagccaccgcgaacagc
gccgctcaggccgatgccttgatgcagcgccaggtgttcgacttatgcttcctcgatctg
cgcctgggcgaggacaatggcctggatgtacttgcccagatgcgcattcaggcgccctgg
atgcgggttgtgattgttaccgcccattccgccgtcgataccgccgttgatgcgatccag
gctggcgctgccgactacctggtcaaaccttgcagccctgatcaactgcgcctcgccacc
gccaagcagttggaagtacgccaactctccgcacgcctcgaagctcttgaaggcgaagtg
cgccagccaaaagacggcctcgattcccacagccctgcaatgatggtggtactggaaacc
gcgcgccaggtggccggcaccgatgccaacattctgatcctgggcgagtccggcaccggt
aaaggcgaactcgcccgcgccatccacggctggagcaagcgctcgaaaaagtcctgcgtc
accatcaactgcccgtcgctgacggcagaactgatggaaagcgagttgtttggtcatagc
cgcggtgcgtttaccggcgccagcgaaagtaccttgggccgcgttaaccaagcggacggc
ggcacgctgtttctcgatgagatcggcgactttcccctcacattgcaacccaagttactg
cgctttattcaggataaggaatacgagcgcgtgggcgatccggtcactcgccgtgccgac
gtgcgtatcctggcagccaccaacctgaatctggaagacatggtccgcgacggccgcttc
cgcgaagacttgctgtaccgcctcaatgtcatcaccttgcacttgccgccgctgcgcgag
cgcagtgaggacatcctgaccctggccgatcgctttctggcgcgcttcgtcaaggaatac
gcccgaccggcgcgtggcttcagcgatgaagcgcgcgaagcactgctcaactaccgctgg
ccgggcaacatccgcgaactgcgcaacgtggtggagcgcgccagtattatctgcccgcaa
gagaaggtggaaatcacccacctgggcatggccgaacagcccggtaacaacgccccacgc
atcggcgcggcgctgagcctggatcagttggaaaaagcccatatcggcgccgtgctcgcc
accagcgacacactggaccaggccgcccgcaccttgggcatcgacgcgtcgaccctgtac
cgcaaacgcaaacagtacaacctgtga
DBGET
integrated database retrieval system
