Pseudomonas canadensis: V6L78_02890
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Entry
V6L78_02890 CDS
T10710
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa03030
DNA replication
pcaa03410
Base excision repair
pcaa03420
Nucleotide excision repair
pcaa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
V6L78_02890 (polA)
03410 Base excision repair
V6L78_02890 (polA)
03420 Nucleotide excision repair
V6L78_02890 (polA)
03440 Homologous recombination
V6L78_02890 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pcaa03032
]
V6L78_02890 (polA)
03400 DNA repair and recombination proteins [BR:
pcaa03400
]
V6L78_02890 (polA)
Enzymes [BR:
pcaa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
V6L78_02890 (polA)
DNA replication proteins [BR:
pcaa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
V6L78_02890 (polA)
DNA repair and recombination proteins [BR:
pcaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
V6L78_02890 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V6L78_02890 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Motif
Other DBs
NCBI-ProteinID:
WWL84866
LinkDB
All DBs
Position
complement(664921..667698)
Genome browser
AA seq
925 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGLPTGAVKGVLNMLKSLRKQYPGSPFAVVFD
AKGGTFRDDMYAEYKANRPSMPDDMRLQIEPLHQSVIALGFPLLCVEGVEADDVIGTLAR
SSAAANRPVVISTGDKDMAQLVDGHITLVNTMTGSSMDIDGVKEKFGVAPEQIIDYLALM
GDSSDNIPGVPGIGPKTASGLLVGVNGGIKELYEQLDIVPTLPIRGAKTLPAKLEEHRES
AFLSYQLATIKCDVPLDVGLDDLHLIEPDREKLLELYTLLEFKSWFDEIQRDAKRVELKA
APVAEEVVEAVAPTEASYTTILDQATFDVWLKKLNDAKLFAFDTETTGIDAQQAQLVGVS
FAVQPHEAAYIPLTHSYIDAPEQLDRDTVLLALKPLLEDPTKLKVGQHAKFDMNILANCA
IGGDPAHGITVRGIAFDTMLESYVLNSTATRHDMDSLAKKYLDYDTVAFQDIAGKGAKQL
TFDQIALEQAGPYAAEDADITLRLHQALFAQLSAIPSLASVLTDIEIPLVPVLARIERQG
ALVDKDLLGIQSIELGNKMVELERQAFEIAGEEFNLGSPKQLGAILYEKLGLPVLKKTGK
GQASTAEEVLAKLAEDDYPLPKVLMQYRSMSKLKSTYTDRLPEQINPRTGRIHTSYHQAV
AATGRLSSSDPNLQNIPVRTAEGRRIRQAFVAPKGYKMLAADYSQIELRIMAHLSKDEGL
MNAFRDNLDVHTATAAEVFKVELGEVTSDQRRSAKAINFGLIYGMGAQKLGKDIGVDTKT
AKAYIDVYFARYPGVREYMERTRAQAADQGYVETFFGRRLYLPDINSNKPQERAAAERTA
INAPMQGTAADIIKKAMVRVDNWLTESGLDAKVILQVHDELVLEVREDLVAQVSEKIREH
MSAAAQLDVPLLVEVGVGNNWDEAH
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcacccctcgtcctggtggacggttcttcttatttgtaccgcgcgttccac
gcgttgccaccgctgaccacctccaaaggcctgcccaccggtgcggtcaagggtgtgttg
aacatgctcaagagcctgcgcaagcagtatccgggcagcccgtttgcggtggtgttcgac
gccaagggtgggacctttcgcgatgacatgtacgccgaatacaaggccaaccgcccgagc
atgcccgatgacatgcgcctgcagatcgagcccctgcaccagagcgtgatcgccctgggt
ttcccgttgctctgcgtcgaaggcgtcgaagccgatgacgtgattggcaccctggcgcgc
agcagcgcggctgccaaccgcccggtggtgatctcgaccggtgacaaggacatggcgcag
ctggtcgacgggcacattaccttggtcaacaccatgaccggtagttcgatggatatcgac
ggcgtaaaggagaaattcggggtcgctccggagcagatcatcgactacctggcgctgatg
ggggattcgtccgacaacattccaggcgttccgggcattggtcccaagactgcttccggc
ttgctcgtcggtgtgaacggcggcatcaaagagctttatgaacagctggatatcgtgccg
accctgcctatccgtggcgccaagacgctgccggccaagctggaagaacatcgcgagagt
gcgtttctttcctaccagttggcgacgatcaagtgcgatgtgccattggatgtcggcctg
gatgacctgcacctgatcgagccggatcgcgagaagctgctggagctgtatacgctgctg
gagttcaagagctggtttgatgaaatccagcgcgacgccaagcgtgtagagctcaaggcg
gctcctgttgctgaggaagtcgttgaggcagtggcgccgacagaggcgagctacaccact
atccttgaccaggcgaccttcgatgtctggttaaagaagctcaacgacgcgaagttgttc
gctttcgacaccgaaaccaccggcatcgacgcccagcaggcgcagttggtcggcgtgtcc
ttcgccgtccagccccacgaagcggcctacattccgctgacccattcctacatcgacgcg
ccggagcagttggatcgcgacaccgtactgctggccctcaagccgctgctggaagacccg
accaagctcaaggtcggccagcatgccaagttcgacatgaacatcctggccaactgtgcc
atcggtggcgacccggcgcacggcattaccgtacgcggcatcgccttcgacaccatgctc
gaatcctatgtgctgaactccactgccacccgccacgacatggacagcctggccaagaag
tacttggactacgacactgtcgctttccaggacatcgccggcaaaggcgccaagcaactg
acgttcgaccagattgcgctggagcaggctggcccgtatgcggcagaagacgccgatatc
accttgcgcctgcatcaggcgctttttgcgcaactatccgccattccaagcctggcgagc
gtgctcacggatatcgaaatcccgttggtgccggtgctggcccgtatcgagcgccaaggc
gcgctggtcgacaaggatttgctgggcatccagagcatcgagttgggcaacaagatggtc
gagctggagcgccaggcgttcgagatcgctggcgaggagttcaacctgggctcgcccaaa
cagctcggcgcgatcctttacgagaaactcggcctgccggtactgaaaaaaaccggcaag
ggccaggcctccacggctgaagaagtgctggccaagctggccgaagatgactacccgctg
cccaaggtgctgatgcaataccgcagcatgagcaagctgaaaagtacctacaccgatcgc
ctgccggagcagatcaacccgcgcaccgggcgcatccacacgtcctatcaccaggcggtg
gcggcgaccgggcggttgtcctccagtgatccgaacctgcagaacatcccagtgcgtacc
gccgaagggcggcggatccgccaggcgttcgtcgcgcccaagggctacaaaatgttggcg
gcggactactcgcagatcgaactgcggatcatggcgcacctgtccaaggacgaaggcctg
atgaacgccttccgcgacaacctggacgtgcacaccgccacggcagcagaggtgttcaag
gttgaactgggcgaggtcacttcggatcaacgccgcagcgccaaggcgatcaacttcggc
ctgatctatggcatgggcgcgcagaagctgggcaaggacattggcgtcgataccaagacg
gccaaggcgtatatcgatgtgtatttcgcccgttatcccggcgttcgcgagtacatggag
cgcacccgcgcccaggcggctgatcagggttatgtcgagacgttcttcggccgccgcctg
tacttgccggacatcaactccaataagccccaagagcgcgcagcggcagaacgtaccgcg
atcaatgcgccgatgcagggcacagcggcggacatcatcaagaaagccatggtgcgggtg
gataattggctgaccgagtcaggcctggatgccaaggtgatcctgcaggtgcacgatgaa
ctggtgctggaggtgcgtgaggatctggtagcgcaggtcagcgagaagattcgcgagcac
atgagcgctgccgcgcagttggatgtgccgctgctggtggaagtgggcgtgggcaacaac
tgggacgaagcgcactga
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