Pseudomonas canadensis: V6L78_03625
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Entry
V6L78_03625 CDS
T10710
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa03420
Nucleotide excision repair
pcaa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
V6L78_03625 (uvrD)
03430 Mismatch repair
V6L78_03625 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pcaa03400
]
V6L78_03625 (uvrD)
Enzymes [BR:
pcaa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
V6L78_03625 (uvrD)
DNA repair and recombination proteins [BR:
pcaa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
V6L78_03625 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
V6L78_03625 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WWL85010
LinkDB
All DBs
Position
complement(818032..820215)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAAPVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGISPAGMWVGTFHGLAHRLLRAHWQEAGLAQTFQILDSDD
QQRLVKRVIRELGLDEQRWPARQAQWFINGQKDEGLRPQHIQASGDLFLATMRSIYEAYE
AACVRAGVIDFSELLLRALDLWRDNPGLLAHYQKRFRHILVDEFQDTNAVQYAWLRLLAK
GGDSLMVVGDDDQSIYGWRGAKIENIYQYSEDFPDAVTIRLEQNYRSTAGILKAANALIA
NNTGRLGKELWTDGGEGEAINLYAAFNEHDEARYVVETIESALKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYLRLLEGRGNDAALERVINIPARGI
GEKTVEAIRDHARHADVSMWEAMRLLIVNKGLTGRAAGALGVFVELIENLAAKCAEMPLH
LMTQTVIEQSGLIAYHEAEKGEKGQARVENLEELVSAARAFENTEEDEELTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQNLVMTYAETRRLYGSETYNKVSRFVREVPKGLIQEVRLSNSVSRPFGGGQ
QQSASTLFAGSEIPETQFSLGQQVRHSVFGEGVILNFEGAGAQARVQVNFAEGSKWLMMG
YAKLEAI
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgatctctcccttttgctgaactccctcaacgatgcccaacgccaggccgta
gcggcccccgttggccgtcagttggtcctggccggtgctggctccggtaaaacccgagtg
ctggtgcaccgtatcgcctggttgatccaggttgaaaacgcgtccccgcattccatcctg
tcggtgaccttcaccaacaaggccgctgccgagatgcgccaccgcatcgagcagttgatg
ggcatcagcccggccggcatgtgggtaggcaccttccacggcctggcgcaccgcctgttg
cgggcgcactggcaggaggcgggcctggcccagaccttccagatcctcgacagcgatgac
caacagcgcctggtcaagcgcgtgatccgcgagctcggcctcgacgaacagcgttggcca
gcgcgccaggcgcaatggttcatcaacggccagaaagacgaaggcctgcgcccgcaacat
atccaggccagcggcgatttgttcctggccaccatgcgcagcatttatgaagcctatgag
gctgcctgcgtgcgcgccggggtcatcgacttctccgagctgctgctgcgcgccctcgac
ctgtggcgcgacaacccaggcctgttggcccattaccagaaacgcttccgccacatcctg
gtggacgagttccaggacaccaacgccgtgcagtacgcctggttgcgcctgctggccaag
ggcggtgacagcctgatggtggtgggcgacgacgaccagtcgatctacggctggcgtggc
gcgaaaatcgagaacatctaccagtattccgaagacttcccggacgcggtgaccatccgt
ctggaacagaactatcgctccaccgccgggatcctcaaggccgccaacgccttgatcgcc
aataacaccgggcgcctgggcaaagagctgtggaccgacggcggcgaaggcgaggcgatc
aacctgtacgccgcgttcaacgagcacgatgaagcgcgttacgtggtggaaaccatcgaa
agcgcgctgaagaccggcctggcgcgcagcgacatcgcgattctgtaccgttccaacgcc
caatcgcgggtcttggaagaagccttgctgcgcgaacgcattccgtaccgcatctatggt
ggccagcgcttcttcgagcgtgcggaaatcaagaacgccatggcttacctgcgcttgctg
gaaggccgtggcaacgatgcggcgctggagcgggtgatcaacatcccggcgcgtggcatc
ggcgagaaaaccgtcgaagcgattcgtgaccatgcgcgccatgccgatgtgtcgatgtgg
gaagccatgcgcttgctcatcgtcaacaaaggcctgaccggccgcgcagccggcgccttg
ggcgtgtttgtcgagctgatcgagaacctggcggccaagtgcgcggaaatgccgttgcac
ttgatgacccagacggtgatcgaacagtccgggctgatcgcttaccacgaagcggaaaaa
ggcgagaaaggccaggccagggtagaaaaccttgaagaactggtgagcgccgcccgtgcg
ttcgaaaacaccgaggaagacgaggagctgaccccgctggccgcgttcctcggccatgca
tcgctggaagccggcgatacccaggcggatgagcatgaagacagcatccaactgatgacc
ttgcacagcgccaagggcctggaattcccctatgtgttcctggtgggcatggaagaaggc
ctgttcccgcacaagatgagcctggaagaacccggccggcttgaggaagaacgccgcctg
gcctacgtgggcatcacgcgcgccatgcagaacctggtgatgacctacgccgagacccga
cgcctgtacggcagcgagacctacaacaaggtgtcgcgcttcgtacgtgaagtgccgaag
ggtctgatccaggaagtgcgcctgtccaacagtgtcagccgcccgttcggtggtggccag
cagcagagcgccagcaccttgtttgccggttccgagattccggaaacccagttcagcctt
ggccagcaggtaaggcactcagtgtttggcgaaggcgtgatcctcaatttcgagggcgca
ggcgcccaggcgcgagtgcaggtgaatttcgccgaaggcagcaaatggctgatgatgggt
tacgcgaagctcgaagccatctga
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