Pseudomonas canadensis: V6L78_03865
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Entry
V6L78_03865 CDS
T10710
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
pcaa Pseudomonas canadensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
RHS
PAAR_motif
Tox-URI2
TEN_YD-shell
Motif
Other DBs
NCBI-ProteinID:
WWL85054
LinkDB
All DBs
Position
complement(870953..875260)
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AA seq
1435 aa
AA seq
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MSDALWAARMGDALTHTSMMADILGGVLEVAANIAITAVATAAVVAATGITVATGGLGCF
LLGAVVGTIVGLAMSKTGADKGLTNLCDTFANALFPPTVQANILTGSTDTLTNSIPAARA
AGAISSHVAPAGTELEAPQPEPEASYLDMAESFFSQMWRPTVATPAPGAVPKPLDLVTCM
KHPPMPPQFLAEGSDKVTINGQPAVRSGDRSTCDATVVSSGLISSNVTIGGGSVVVREIR
SGKTPGVGLAVTALLMLKGGKGKFFSKLPCMLIGGATSMAVSSAMGAVANAAMGSSNPVH
AATGAKVLGNAEELDFVLPGILPIDWQRFYNSSDERSGGMFGAGWSVPYEVCVEILSHSE
GGEALIYTDEQGRPIDMGSIPLGGAVFSAGEGLAVRRHLNGQLLIESDDGLYRLFEPTAD
PSLLRLTQLGDRNDNRIHVDYDEAGRLVRLRDTFDLVQVELIHDQGQLARIERLYPDQRR
EVLVSYGFDTQGNLAEVRDAMGQVQRRFAYDSGRRMVEHQLPTGLRCFYEWSLVEGLEWR
VVRHWTDEGDAYQFDYDLQTGITRITDGLQRVGTRHWNSQHQIIRYSDNLDHTWLFEWSD
ERQLLSATDPLGGRFEYSYDETGNLIGETDPLGRSDSTLWLEHWALPLVETDAADNSWQY
RYDSRGNCIAETDPLGYVTRYRYDAHGQPVEIIDATGKSKKLRWNPFGQLVEHIDCSGYP
TRFSYDERGYLQVITDALGERTQFSYDAQGRLLTTQLPDGRTEQYQRAVSGQLVGYTDPA
GHTTLYQHNRRGLVSQRIDAHGRQVQFGYDSYGRLQALINENGERYRFAWDAGDRLVEQQ
DLDGSAKHYSYDPLDNVTAVTAVPAPYGNGLALVPETPPVPIVHRLERDAVGRLIAKTTD
DGRTDYSYDAVDQLTAVTFTDSQGNAQALGFAYDALGQLLCEQSSAGNLQHHYDELGNLI
QTQLPDGRWLNRLYYGSGHLHQINLDGQVISDFERDRLHREVLRTQGQLTTRSEYDRSGR
LRSRQRRLASQPSLMPAAAQKQFEYDPADNLIGKLDQQPAAQQRQLLHYDATGRIIASQD
SPHGQRETFAYDAAANLLDGPQAGVGLVVHNKLLTYQDKRYRYDAFGRTIEKRSAKRGVQ
RFAYDAESRLVEVRNDDGSVVRMTYDPLGRRIEKTEHGSDGYPLGETQFVWDGLRLLQEH
KHSQTSLYVYDDDGYEPLARVDGMGPLQKIRYYHNDLNGLPEQLTEADGHGVWQATYRVW
GNTLEEVREPYYIEEQNLRFQGQYLDRETGLHFNTFRFYDPDVGRFTTPDPIGFDGGLNF
YQYAPNPISWIDPWGLAPELYYLIAKKDGLYDEMAWGHKKPVGKVYLKKGEVWKVGETVN
PNRRYTQKWLKANNLAYKRVMAAPTKGNMQVWERLKIGKYFKRRGKLPPGNKCRH
NT seq
4308 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacgcgttatgggccgcccggatgggcgatgcactgacccacacctcgatgatg
gcggatatcctgggtggggtgctggaggtggcggccaatatcgcgatcacggctgtggcg
acggcggctgtcgtcgccgccactgggattaccgtcgccaccggtgggcttggctgtttc
ctgctgggcgcggtggtgggcaccattgtcggcctggccatgagcaagaccggggccgac
aaaggcctgacgaatttatgcgatacgttcgccaacgcgctgtttccgcccacggtgcag
gccaatattcttaccggctccaccgataccctgaccaacagcatccctgctgcccgcgcc
gccggagcgatcagttcccatgtagcgccggccggtaccgagctggaagcgccccagcca
gagccagaagccagctacctggacatggccgagagtttcttctcgcagatgtggcggccc
acagtcgccaccccggcgccgggggccgtgcccaagccgctggatctggtcacctgcatg
aagcatcccccgatgccgccgcagttcctggccgaaggatcggacaaagtcaccatcaac
ggccaaccggcggtgcgcagtggtgatcgcagtacctgtgatgcgacggtggtgtcgtcg
gggctgatttcctccaacgtgaccattggcggcggctcggtggtggtgcgcgagattcgc
agcggcaagacaccgggcgtggggctggcggtcacggcactgttgatgctcaagggtggc
aagggcaagttcttcagcaagttgccgtgcatgttgatcggcggggccacatcgatggcg
gtcagcagcgcgatgggggccgtggcgaacgcagcgatgggttcatcgaatccggtgcat
gcggccacgggcgcgaaggtgctgggcaatgccgaggagctggattttgtgctgcccggc
atcctgccgatcgactggcagcgcttctacaacagcagcgatgagcgctcgggcggaatg
tttggcgcaggctggagcgtgccctatgaagtgtgcgtcgaaatcctgtcccattcagag
ggcggtgaagcgctgatttataccgatgagcaaggtcggcctatcgacatgggctccatc
cccctgggcggtgccgtgttcagcgcgggtgaagggctggccgtgcggcggcatctcaat
gggcagctgttgatcgagagcgatgacggcttgtatcgcttgttcgagcccactgccgac
ccatcgctgctgcgcctgactcaactgggcgaccgtaacgacaaccgcatccatgtcgac
tacgacgaagccggtcgcctggtgcggctgcgtgatacgttcgatctcgtgcaggttgag
ttgatccatgatcaaggccagttagcgcgcatcgagcgtctgtaccctgatcagcgccga
gaagtgctggtcagttatggcttcgacacgcagggcaacctggctgaagtgcgcgatgcg
atgggccaggttcagcgtcgttttgcctacgacagcggtcgcaggatggtggagcatcaa
ctgccgaccgggctgcgttgcttctacgaatggtctttggttgaaggtttggaatggcgc
gtggtccggcactggaccgatgagggcgacgcttaccagttcgactatgacttgcagacc
ggtatcacccgtattaccgacggcttgcaacgcgttggtacccggcattggaacagccaa
caccagatcattcgctacagcgacaacctcgaccacacctggctgttcgaatggagcgac
gagcgccagttgctcagtgccaccgacccgctgggagggcgctttgaatacagctacgac
gagaccggcaacctgatcggcgaaaccgacccgctgggtcgcagcgattcgacgctgtgg
ttggaacattgggccttgcccctggtggaaaccgacgccgccgacaacagctggcaatat
cgctatgactcacgcggcaactgcatcgccgaaaccgatccactgggctacgtcacgcgc
tatcgttatgacgcccacggccagcccgtggaaattattgacgccaccggcaaaagcaaa
aagctgcgctggaacccgttcggacaactggtcgagcacatcgactgctcaggttacccg
actcgattcagctacgacgagcgcggctatctgcaggtcattaccgatgccctgggtgag
cgtacccaattcagctatgacgctcagggccgtctgctcaccacccaattgccggacggc
cgtaccgagcagtaccagcgcgcggtcagcggccaattggtgggctacaccgacccggcc
gggcatacgacgctctatcaacacaaccgccgtggcctggtcagccagcgcatcgacgcc
catggtcggcaagtgcagttcggctacgacagctatggacggctgcaagcgctgatcaac
gaaaacggcgagcgttatcgttttgcctgggatgccggcgaccgtctggttgaacagcag
gacctcgacggcagcgccaagcactacagctatgacccgctggataacgtcacggcggtg
actgccgtgccggcgccttacggaaacggtctggccctggtgcccgaaacgccgcccgtg
cctatcgtccatcgattggaacgcgatgcagtgggccggctgattgccaagaccaccgac
gatggccgcaccgactacagctacgacgcagtggaccagctcacggctgtcaccttcacc
gattcacagggcaacgcccaagccctgggttttgcctacgacgccctcggccaactgctt
tgcgagcagagttcggcgggcaacctgcaacaccattacgacgaactcggcaacctgatc
cagacccaactgccggacggccgctggctcaaccgcctttactacggcagcggccatctg
caccagatcaacctagacggccaggtcatcagcgacttcgagcgtgaccgcctgcaccgc
gaagtactgcgcactcagggccagctcaccacccgcagcgaatacgaccgtagtggccgc
ctgcgttcgcgccaacgccgcttggcaagtcagccatcgttgatgccggcggccgcgcaa
aaacagttcgaatacgaccccgccgacaacctgatcggcaaactcgaccaacaacccgcc
gcgcagcaacgccaattgctgcactacgacgccaccggccgcatcatcgccagccaggac
agcccgcacggccagcgtgaaaccttcgcctacgatgccgctgccaacctgctggatgga
ccgcaggcgggtgttgggttggtggtgcataacaagttgctgacctatcaggacaagcgt
tatcgctatgacgcgtttggccgcacgattgaaaaacgcagcgcgaaacggggtgtgcag
cggtttgcctacgatgctgaaagccgcttggttgaagtgcgtaacgatgacggcagcgtc
gtgcgaatgacctatgacccactgggccgacgcatcgaaaaaaccgagcatggcagtgac
gggtatccgctgggagaaacgcagtttgtgtgggatggactgcggttgctgcaggagcat
aaacacagccagaccagcctctatgtttatgacgatgacggctatgaaccgctggcccgc
gtcgacggcatgggcccgttgcagaagattcgctactaccacaacgacctgaacgggttg
ccggaacaactgaccgaggcagatgggcacggcgtctggcaggcgacttatcgggtgtgg
ggcaacacgcttgaggaagtgcgcgagccttattacattgaagagcagaacctgcggttc
caggggcagtatctggatcgggagacggggctgcatttcaatacgttcaggttttatgat
ccggatgtggggcggtttactacgccggatccgattgggtttgatggtgggctcaatttt
taccagtacgcccccaatccaatatcctggattgatccatggggtctggcccccgagctt
tactatctgattgcgaagaaagatggcctttatgatgaaatggcgtggggccataaaaag
ccagttggtaaagtttatttgaagaaaggtgaagtctggaaagtcggtgaaactgtcaat
ccgaacaggcgatacacgcaaaagtggctcaaagctaacaacctcgcttacaaacgcgtg
atggcggcccccacgaaaggcaacatgcaagtatgggaaaggctaaaaatcggaaagtat
ttcaaacgccgaggaaaactgcctccaggtaacaagtgcagacactaa
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