Pseudomonas canadensis: V6L78_03880
Help
Entry
V6L78_03880 CDS
T10710
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02025
Biofilm formation - Pseudomonas aeruginosa
pcaa03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
V6L78_03880 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
V6L78_03880 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcaa02044
]
V6L78_03880 (tssH)
Secretion system [BR:
pcaa02044
]
Type VI secretion system
Imp/Vas secretion system core components
V6L78_03880 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Clp_N
NBD_SMAX1
Zeta_toxin
AAA_25
Sigma54_activat
TniB
nSTAND3
AAA_7
ATPase_2
NACHT
AAA_14
Torsin
AAA_18
CbiA
Hpr_kinase_C
SRP54
Motif
Other DBs
NCBI-ProteinID:
WWL85057
LinkDB
All DBs
Position
complement(877814..880477)
Genome browser
AA seq
887 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELAHWFHQLLQLQDSDLHRIIRQF
NVEPARLARDLTEALDRLPRGSTSITDLSSHVEEAVERGWVYGSLMFGESQVRTGYLVLG
ILKTPSLRHALLGLSAEFDKIKAEALSERFDEYVGDSPENALSASDGFNAGAVPGEASGA
MAPSAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAG
VGKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQAS
PKPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGTLRTVAATTWAEYKKHIEKDPAL
TRRFQVVQVAEPSEDKALLMMRGVASTMEKHHQVQILDEALEASVKLSHRYIPARQLPDK
SVSLLDTACARVAISLHAVPAEVDDSRRRIEALETELQIIAREHAIGIAIGARQTNTEAL
LSAERERLATLESRWAEEKTLVDELLATRATLREKAGVVDSGNDELRAQLVDLQQRLTAL
QGETPLILPTVDYQAVASVVADWTGIPVGRMARNELETVLNLDQHLKKRIIGQDHALQMI
AKRIQTSRAGLDNPSKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNVITINMSEFQEA
HTVSTLKGAPPGYIGYGEGGVLTEAVRRKPYSVVLLDEVEKAHPDVHEIFFQVFDKGVME
DGEGRVIDFKNTLILLTTNAGTELISQVCKDPANIPEPEEIAKALRQPLLEIFPPALLGR
LVTIPYYPLSDEMLKAITRLQLNRIKKRVETTHKVAFDYDDAVVDLIVSRCTETESGGRM
IDTILTNSLLPDMSREFLTRMLEGKALAGVRISSRDNELHYDFSDAG
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagtcgcgccgcactgttcggcaaactcaacagcgtggcctacaaggcc
atcgaagccgccaccgtgttctgcaaactgcggggcaacccgtatgtggaactggcccac
tggttccaccagttgctgcaattgcaggactcggacctgcaccgcatcatccgtcaattc
aacgtggagccggcgcgcctggcccgtgacctgaccgaagcgctggaccgtttgccgcgt
ggctcgacgtcgatcaccgacctgtcctcccatgtggaagaagccgtggaacgcggctgg
gtctacggcagcctgatgtttggtgaaagccaggtgcgtaccggctacctggtgctgggc
atcctgaagacgcctagcctgcgtcatgcactgctgggcttgtctgccgagttcgacaag
atcaaggccgaggccctgagcgagcgtttcgacgagtacgtcggtgattcgccggagaac
gcgctgagcgccagtgatggtttcaatgccggtgccgtgcccggtgaagccagcggtgcg
atggcgccgagcgcgatgggcaagcaggaagccctcaagcgcttcacggtcgacctgacc
gaacaggcccgcagcggcaagctcgacccgattgttggccgtgacgaagagatccgccaa
ctggtcgacatccttatgcgtcggcgccagaacaacccgatcctcactggcgaagccggg
gtgggcaagactgccgtggtcgaaggtttcgccctgcgcatcgtcgccggtgatgtgccg
ccagccctgaaagacgtggaactgcgcagcctcgacgtgggcctgctgcaagctggcgcg
agcatgaaaggcgagttcgaacagcgcctgcgtcaggttatcgaagacgtgcaggcctcg
cccaagccgatcattctgtttatcgacgaagcccacacactggtgggtgccggcggcgcc
gccggcaccggtgacgcagccaacctgctcaagccggccttggcccgcggcaccttgcgt
accgtggccgccaccacctgggccgagtacaagaagcacattgagaaagacccggccctg
acccgccgcttccaagtggtgcaggtggccgaaccgtcggaagacaaagcgctgctgatg
atgcgtggcgtggcgtcgaccatggaaaaacatcaccaggtgcagattctcgacgaagcg
ctggaagcctcggtgaagctgtcccaccgctacatcccggcgcgccagctgccggacaag
tccgtgagcctgctggacaccgcctgcgcccgcgtcgccatcagcctgcacgcggtgccg
gcggaagtggacgacagtcgtcgtcgcatcgaggcgctggaaaccgagttgcaaatcatc
gcccgtgagcatgccatcggcattgcgattggtgcgcgccaaaccaacaccgaggcgctg
ttgagcgctgagcgtgagcgtctggcgaccttggaaagccgttgggctgaagagaaaacc
ttggtggacgagttgctagccacccgagcaacgctgcgtgaaaaggcgggcgtggtggac
agtggcaacgatgagctgcgcgcccaactggtcgacctgcaacagcgcctcaccgccctg
caaggcgaaaccccgctgatcctgcccaccgtggattaccaggccgtggcctcggtggtc
gctgactggaccggcatcccggtgggccgcatggcgcgcaatgaattggagacggtgctc
aacctcgaccagcacctgaaaaaacgcatcatcggccaggaccatgccctgcagatgatc
gccaagcgcatccagacctcccgcgccggcctcgacaacccgagcaagccgattggcgtg
ttcatgctggccggcacctccggcgtgggcaagaccgaaactgccctggccctggccgaa
gccatgtacggcggtgagcagaacgtcatcaccatcaacatgagcgaattccaggaagcc
catacggtgtcgaccctcaagggcgcgccaccgggctatatcggctacggcgaaggcggc
gtgctgaccgaagccgtgcggcgcaaaccctacagcgtggtgctgctggacgaggtggaa
aaagcccacccggacgtgcatgagatcttcttccaggtgttcgacaaaggcgtgatggaa
gatggtgaaggccgggtgatcgacttcaagaacaccctgatcctgctgaccaccaacgcc
ggcaccgagctgatttcccaagtctgcaaagacccggcgaacatccctgagccggaagaa
atcgccaaggctttgcgccagccgctgctggaaatcttcccgcccgcgttgctcggccgc
ctggtgaccatcccttactacccgctcagcgacgagatgctcaaggcgatcacccgcctg
caactcaaccgcatcaaaaagcgcgtagagaccacccacaaggtggctttcgattacgac
gacgcggtggtcgacctgatcgtctcgcgctgcaccgagaccgaaagcggcgggcgcatg
atcgataccattctgaccaacagcctgctgccggacatgagccgtgaattcctcacgcgc
atgctcgaaggcaaggcgctggcgggcgtgcgcatcagcagccgggataatgaattgcac
tacgacttcagcgacgccggctga
DBGET
integrated database retrieval system
