KEGG   Pseudomonas canadensis: V6L78_03890
Entry
V6L78_03890       CDS       T10710                                 
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
  KO
K11896  type VI secretion system protein ImpG
Organism
pcaa  Pseudomonas canadensis
Brite
KEGG Orthology (KO) [BR:pcaa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pcaa02044]
    V6L78_03890 (tssF)
Secretion system [BR:pcaa02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   V6L78_03890 (tssF)
SSDB
Motif
Pfam: T6SS_TssF
Other DBs
NCBI-ProteinID: WWL85059
LinkDB
Position
complement(881477..883336)
AA seq 619 aa
MNPRLLELYNQELHHVRESAAEFAKEYPKIASRLTLSGMDCADPYVERLLEGFAYLTARV
QLKLDAEYPTFTHNLLEIAYPHYLAPTPSMTVVQLQTDPDEGSLASGFPLPRDTVLRAAL
GRETQTCCEYRTAHPVTLWPLQVSNAEYFGNPAAVLGRLAASEPKAKAGLRLTLRTGAEL
PFNSLDLDNLPLYLSGADEQPFRLYEQLLGNACAVFARKPGGDWVERLPQDALRSRGFDD
ADAAMPVVSRAFQGYRLLQEYFALPHRYLFVEFAELSRAVKRCDGQELELIVLFDRHEPS
LEGSVGAAQFLPFCTPAINLFPKRVDRIHLSDRVNEHHVIADRTRPMDFEIHSLSGITGH
GTGPEQPFLPFYAVRDPSRYGRDQAYYTVRREPRVLSSDQRRNGPRSTYVGSETFVSLVD
SRQAPYGHDLRQLGVTALCTNRDLPLFMSIGNGKTDFTLADSAPVLSVRCVAGPSRPRAS
HAHDAKAWRLISQLSLNYLSLSEQGQGAAALRELLRLYGDSNDAALQLQIEGLREVSSKA
VTRRLPMPGPIVFGRGLEITLEFDENAFRGTGVFLLGAVLERFLARYVSINSFTETVIRT
TERGEIMRWKAKPGRRPTL
NT seq 1860 nt   +upstreamnt  +downstreamnt
atgaacccgcgcctgctggagctgtacaaccaggaactgcaccacgtgcgcgaaagcgcc
gccgagtttgccaaggaatatccgaagatcgccagtcggctgaccctgtccggcatggac
tgcgccgacccgtacgtcgaacgtttgctcgaaggctttgcctacctcacggcccgcgta
cagctcaagctcgacgccgagtacccgaccttcacccacaacctgctggaaatcgcctac
ccgcattacctggcacccacgccgtcgatgaccgtggtgcaattgcagaccgacccggac
gagggctcgctggccagtggtttcccgctgcctcgcgacaccgtattgcgcgctgcgctg
ggccgcgaaacccagacctgctgcgagtaccgcaccgcgcacccggtgacgctgtggccg
ttgcaggtgagcaatgccgaatacttcggcaaccctgccgccgtgttgggtcgcctggcc
gccagtgagccgaaagccaaggccggcctgcgcctgaccctgcgcaccggcgccgaattg
ccgttcaacagccttgacctggataacctgccgctctacctcagcggtgccgacgagcaa
ccattccgcctctacgaacaactgctgggcaatgcctgcgcggtgtttgcacgcaagccg
ggtggcgattgggtcgagcgcctgccgcaggatgcactgcgctcccgtggttttgacgat
gccgacgccgccatgccggtggtctcacgcgcgttccagggctatcgcttgttgcaggaa
tacttcgccctgccccaccgttacctgttcgtcgagttcgctgagctgagccgtgcggtc
aagcgttgcgacggccaggagctggagctgatcgtgttgttcgaccgtcatgagccaagc
ctggaaggcagcgtcggcgcggcgcagttcctgccgttctgcacgccagcaatcaacctg
ttccccaagcgcgtggaccgcatccacttgtccgaccgggtcaacgaacaccatgtgatc
gccgaccgcacgcggccgatggacttcgagattcactcgttgagcggcatcaccggtcac
ggtaccgggccggagcagccgtttttgccgttctatgccgtgcgtgatccatcacgctac
ggccgcgaccaggcgtattacaccgtacgcagggagccccgcgtcttatccagcgaccag
cgccgcaacggcccacgctccacctatgtgggcagtgagacctttgtcagcctggtggac
agtcgccaagcgccctacggccatgacttgcgccaactcggcgtgactgcgctgtgcact
aaccgcgacttgcctctgttcatgagcatcggcaacggcaagaccgacttcaccctcgcc
gacagcgccccggtgctgtccgtgcgttgcgtggcaggcccgagccgcccgcgcgccagc
catgcccatgacgccaaggcctggcgcttgatcagccagttgtcgctcaactacctgtcc
ctgagcgaacagggccaaggcgcggcggccttgcgcgaactgctgcgcctgtatggcgac
agcaacgatgccgccctgcaattgcagatcgaaggcctgcgcgaggtcagcagcaaagcc
gtgacccgacgtttgccgatgcccggcccgatcgtgtttggccgtggcctggaaatcacc
ttggaattcgatgaaaacgcgtttcgcggcaccggcgtgttcctgctcggtgcggtgctg
gagcgcttcctggcacgctacgtgtcgatcaacagttttaccgagacggtgatccgtacc
accgaacgcggcgagatcatgcgatggaaagccaagcccggacggcgtccgaccctgtga

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