Pseudomonas canadensis: V6L78_03910
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Entry
V6L78_03910 CDS
T10710
Symbol
tssB
Name
(GenBank) type VI secretion system contractile sheath small subunit
KO
K11901
type VI secretion system protein ImpB
Organism
pcaa Pseudomonas canadensis
Pathway
pcaa02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pcaa00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
V6L78_03910 (tssB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pcaa02044
]
V6L78_03910 (tssB)
Secretion system [BR:
pcaa02044
]
Type VI secretion system
Imp/Vas secretion system core components
V6L78_03910 (tssB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_VipA
HTH_NPRL3
Motif
Other DBs
NCBI-ProteinID:
WWL85063
LinkDB
All DBs
Position
complement(886052..886558)
Genome browser
AA seq
168 aa
AA seq
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MAKQSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVMADLAGKPAEPLAPVADRK
FLEVDVDNFDSRLKAMQPRVAFHVPNELTGEGNLSLDITFESMDDFSPAAVARKVDSLNQ
LLEARTQLANLLTYMDGKTGAEEIIMKAIKDPALLQALASAPKPAGDQ
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
gtggcgaagcaaagttctcagaaattcatcgcgcgcaaccgcgcgcctcgagtgcagatc
gagtacgacgtcgagctttacggcgccgagaaaaaggtccagctgcccttcgtgatgggc
gtgatggccgacctcgccggcaagcccgccgagcctctggcgccggtggccgaccgcaag
ttccttgaagtggacgtcgacaatttcgactcacgcctcaaggccatgcaaccgcgcgtg
gcgttccacgtaccgaacgagctgaccggcgaaggcaacctgagcctggacatcaccttc
gaaagcatggacgacttcagcccggccgccgtggcgcgcaaagtcgactcgctgaaccaa
ctgctcgaagcccgcacccagctggccaacctgctgacctacatggacggcaagaccggc
gctgaagaaatcatcatgaaggcgatcaaggacccggcactgctccaggcacttgccagc
gcgccgaagcctgcaggggatcagtaa
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